Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30710

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
2,266,243	+		RR42_RS30705	0.58	-0.3
2,266,243	+		RR42_RS30705	0.58	-0.2
2,266,243	+		RR42_RS30705	0.58	-0.6
2,266,244	-		RR42_RS30705	0.58	-0.3
2,266,244	-		RR42_RS30705	0.58	+0.1
2,266,244	-		RR42_RS30705	0.58	+0.1
2,266,244	-		RR42_RS30705	0.58	-0.8
2,266,244	-		RR42_RS30705	0.58	+1.5
2,266,244	-		RR42_RS30705	0.58	+0.6
2,266,244	-		RR42_RS30705	0.58	+0.5
2,266,244	-		RR42_RS30705	0.58	-0.2
2,266,244	-		RR42_RS30705	0.58	-0.1
2,266,355	-		RR42_RS30705	0.65	+0.7
2,266,430	+		RR42_RS30705	0.71	+0.0
2,266,430	+		RR42_RS30705	0.71	+0.9
2,266,431	-		RR42_RS30705	0.71	-0.6
2,266,432	+		RR42_RS30705	0.71	-0.5
2,266,432	+		RR42_RS30705	0.71	+0.2
2,266,432	+		RR42_RS30705	0.71	+0.4
2,266,433	-		RR42_RS30705	0.71	+0.2
2,266,433	-		RR42_RS30705	0.71	-0.5
2,266,450	+		RR42_RS30705	0.72	-0.1
2,266,450	+		RR42_RS30705	0.72	+0.2
2,266,451	-		RR42_RS30705	0.72	+0.2
2,266,451	-		RR42_RS30705	0.72	+0.1
2,266,454	-		RR42_RS30705	0.72	+0.9
2,266,454	-		RR42_RS30705	0.72	-0.3
2,266,469	-		RR42_RS30705	0.73	-0.3
2,266,485	-		RR42_RS30705	0.74	-0.1
2,266,566	+		RR42_RS30705	0.80	+0.2
2,266,627	+		RR42_RS30705	0.84	-1.4
2,266,627	+		RR42_RS30705	0.84	-0.5
2,266,628	-		RR42_RS30705	0.84	-0.4
2,266,628	-		RR42_RS30705	0.84	+0.2
2,266,699	+		RR42_RS30705	0.89	-0.5
2,266,699	+		RR42_RS30705	0.89	+0.3
2,266,699	+		RR42_RS30705	0.89	+0.5
2,266,699	+		RR42_RS30705	0.89	-0.2
2,266,699	+		RR42_RS30705	0.89	-1.3
2,266,700	-		RR42_RS30705	0.89	-0.4
2,266,700	-		RR42_RS30705	0.89	+0.4
2,266,700	-		RR42_RS30705	0.89	+0.2
2,266,700	-		RR42_RS30705	0.89	-0.7
2,266,700	-		RR42_RS30705	0.89	-1.1
2,266,700	-		RR42_RS30705	0.89	+0.1
2,266,784	-				-0.5
2,266,784	-				-0.7
2,266,784	-				-0.4
2,266,784	-				+0.5
2,266,784	-				-0.6
2,266,816	+				-0.5
2,266,817	-				+0.3
2,266,852	-				+1.6
2,266,966	-				+0.6
2,266,966	-				-1.7
2,267,040	+				-0.5
2,267,040	+				-0.5
2,267,041	-				+0.3
2,267,041	-				-0.3
2,267,054	+				+0.2
2,267,054	+				+0.6
2,267,054	+				+2.3
2,267,055	-				-1.4
2,267,072	+				-0.6
2,267,102	+				-0.1
2,267,103	-				-0.5
2,267,103	-				+0.0
2,267,122	-				-0.5
2,267,135	+				-0.6
2,267,136	-				-0.2
2,267,143	+				+0.7
2,267,143	+				-0.5
2,267,155	+				-1.1
2,267,155	+				+1.6
2,267,156	-				-0.8
2,267,293	+		RR42_RS30710	0.20	+0.6
2,267,293	+		RR42_RS30710	0.20	+0.8
2,267,294	-		RR42_RS30710	0.21	+0.1
2,267,294	-		RR42_RS30710	0.21	-0.2
2,267,310	+		RR42_RS30710	0.23	+0.2
2,267,310	+		RR42_RS30710	0.23	+0.8
2,267,311	-		RR42_RS30710	0.23	+0.0
2,267,311	-		RR42_RS30710	0.23	-0.0
2,267,311	-		RR42_RS30710	0.23	+1.1
2,267,311	-		RR42_RS30710	0.23	+0.7
2,267,313	+		RR42_RS30710	0.24	-0.0
2,267,313	+		RR42_RS30710	0.24	+0.4
2,267,434	-		RR42_RS30710	0.44	+0.7
2,267,478	+		RR42_RS30710	0.51	+0.1
2,267,478	+		RR42_RS30710	0.51	-0.5
2,267,478	+		RR42_RS30710	0.51	+0.7
2,267,479	-		RR42_RS30710	0.51	+0.6
2,267,633	-		RR42_RS30710	0.76	+0.7
2,267,654	-		RR42_RS30710	0.80	+0.4
2,267,661	+		RR42_RS30710	0.81	+0.3
2,267,749	+				-0.2
2,267,750	-				-0.7
2,267,793	-				-0.2
2,267,858	-				-0.1
2,267,858	-				-1.5
2,267,887	-				+0.4
2,267,897	-				+0.5
2,267,968	+				-0.9
2,267,969	-				+0.6
2,267,999	+				-3.2
2,267,999	+				-0.2
2,268,052	+				-1.3
2,268,389	+		RR42_RS30715	0.23	+0.0
2,268,462	+		RR42_RS30715	0.29	-0.1
2,268,462	+		RR42_RS30715	0.29	+2.9
2,268,463	-		RR42_RS30715	0.29	-0.7
2,268,699	+		RR42_RS30715	0.49	+0.4
2,268,699	+		RR42_RS30715	0.49	+1.4
2,268,699	+		RR42_RS30715	0.49	-0.2
2,268,699	+		RR42_RS30715	0.49	-0.2
2,268,709	+		RR42_RS30715	0.50	-0.9