Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30045

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
2,112,299	-		RR42_RS30040	0.52	+0.3
2,112,299	-		RR42_RS30040	0.52	-0.1
2,112,357	-		RR42_RS30040	0.55	-0.0
2,112,366	-		RR42_RS30040	0.56	+0.1
2,112,394	+		RR42_RS30040	0.57	+0.4
2,112,394	+		RR42_RS30040	0.57	+0.0
2,112,394	+		RR42_RS30040	0.57	-0.1
2,112,394	+		RR42_RS30040	0.57	-0.4
2,112,395	-		RR42_RS30040	0.57	-0.3
2,112,395	-		RR42_RS30040	0.57	+0.2
2,112,395	-		RR42_RS30040	0.57	+0.1
2,112,395	-		RR42_RS30040	0.57	+0.1
2,112,413	+		RR42_RS30040	0.58	-0.0
2,112,414	-		RR42_RS30040	0.58	-0.2
2,112,426	+		RR42_RS30040	0.59	+1.0
2,112,515	+		RR42_RS30040	0.63	-0.4
2,112,515	+		RR42_RS30040	0.63	-0.2
2,112,515	+		RR42_RS30040	0.63	+0.2
2,112,516	-		RR42_RS30040	0.63	-0.8
2,112,516	-		RR42_RS30040	0.63	-0.8
2,112,516	-		RR42_RS30040	0.63	+0.3
2,112,516	-		RR42_RS30040	0.63	-0.2
2,112,516	-		RR42_RS30040	0.63	+0.8
2,112,516	-		RR42_RS30040	0.63	-1.5
2,112,516	-		RR42_RS30040	0.63	+0.0
2,112,516	-		RR42_RS30040	0.63	-0.7
2,112,597	+		RR42_RS30040	0.67	-0.1
2,112,617	+		RR42_RS30040	0.68	+0.3
2,112,647	+		RR42_RS30040	0.69	+0.8
2,112,648	-		RR42_RS30040	0.70	-1.3
2,112,648	-		RR42_RS30040	0.70	-0.2
2,112,648	-		RR42_RS30040	0.70	+0.0
2,112,741	-		RR42_RS30040	0.74	+0.0
2,112,741	-		RR42_RS30040	0.74	-3.1
2,113,242	-				+1.5
2,113,510	-		RR42_RS30045	0.17	+0.0
2,113,620	+		RR42_RS30045	0.24	-0.2
2,113,620	+		RR42_RS30045	0.24	+0.4
2,113,821	-		RR42_RS30045	0.37	-0.8
2,113,876	-		RR42_RS30045	0.41	-0.4
2,113,876	-		RR42_RS30045	0.41	+0.5
2,114,070	+		RR42_RS30045	0.53	-0.3
2,114,097	-		RR42_RS30045	0.55	-0.2
2,114,097	-		RR42_RS30045	0.55	-0.5
2,114,310	+		RR42_RS30045	0.69	-0.3
2,114,310	+		RR42_RS30045	0.69	+0.2
2,114,310	+		RR42_RS30045	0.69	+0.1
2,114,311	-		RR42_RS30045	0.69	-0.2
2,114,386	-		RR42_RS30045	0.74	-0.6
2,114,404	+		RR42_RS30045	0.75	+0.6
2,114,431	-		RR42_RS30045	0.77	-1.2
2,114,431	-		RR42_RS30045	0.77	-0.4
2,114,431	-		RR42_RS30045	0.77	+0.4
2,114,574	+		RR42_RS30045	0.86	-0.5
2,114,616	+		RR42_RS30045	0.89	+0.5
2,114,616	+		RR42_RS30045	0.89	-1.5
2,114,617	-		RR42_RS30045	0.89	+0.3
2,114,617	-		RR42_RS30045	0.89	+0.2
2,114,639	+				+0.1
2,114,640	-				+0.4
2,114,640	-				-0.3
2,114,640	-				-0.2
2,114,640	-				+0.3
2,114,640	-				-1.4
2,114,640	-				+0.1
2,114,640	-				+0.2
2,114,662	+				-0.1
2,114,662	+				+0.7
2,114,663	-				+0.4
2,114,663	-				-0.1
2,114,663	-				+0.6
2,114,663	-				+0.5
2,114,722	-				+0.2
2,114,722	-				+0.8
2,114,933	-				+0.2
2,114,933	-				+0.1
2,114,941	-				+0.3
2,115,362	+				+1.0
2,115,362	+				-1.5
2,115,363	-				-0.1
2,115,437	+				-0.2
2,115,438	-				+0.1
2,115,545	-		RR42_RS30055	0.48	+1.4
2,115,564	+		RR42_RS30055	0.55	+1.6
2,115,564	+		RR42_RS30055	0.55	-0.0
2,115,564	+		RR42_RS30055	0.55	-0.3
2,115,564	+		RR42_RS30055	0.55	-0.1
2,115,565	-		RR42_RS30055	0.56	+0.6
2,115,708	+				-0.1
2,115,709	-				+0.6
2,115,709	-				+0.3
2,115,709	-				+0.6
2,115,788	+				-1.0