Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28300

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
1,708,498	+		RR42_RS28295	0.21	-0.3
1,708,499	-		RR42_RS28295	0.21	+0.7
1,708,499	-		RR42_RS28295	0.21	-0.7
1,708,508	-		RR42_RS28295	0.21	+0.2
1,708,693	+		RR42_RS28295	0.37	-0.1
1,708,693	+		RR42_RS28295	0.37	+0.8
1,709,014	+		RR42_RS28295	0.64	-0.5
1,709,140	+		RR42_RS28295	0.74	+0.7
1,709,177	+		RR42_RS28295	0.77	-0.1
1,709,252	+		RR42_RS28295	0.83	-2.3
1,709,306	+		RR42_RS28295	0.88	-0.7
1,709,306	+		RR42_RS28295	0.88	-0.0
1,709,306	+		RR42_RS28295	0.88	-0.3
1,709,307	-		RR42_RS28295	0.88	+1.0
1,709,307	-		RR42_RS28295	0.88	+0.2
1,709,307	-		RR42_RS28295	0.88	-2.7
1,709,324	+		RR42_RS28295	0.89	-0.6
1,709,469	-				+0.4
1,709,530	+				+0.7
1,709,665	+		RR42_RS28300	0.22	-0.2
1,709,666	-		RR42_RS28300	0.22	+1.5
1,709,786	+		RR42_RS28300	0.35	-0.9
1,709,787	-		RR42_RS28300	0.35	-0.2
1,709,787	-		RR42_RS28300	0.35	+0.3
1,709,787	-		RR42_RS28300	0.35	+0.8
1,709,787	-		RR42_RS28300	0.35	+1.1
1,710,049	+		RR42_RS28300	0.62	-0.8
1,710,049	+		RR42_RS28300	0.62	+0.5
1,710,050	-		RR42_RS28300	0.62	+0.1
1,710,050	-		RR42_RS28300	0.62	+0.7
1,710,050	-		RR42_RS28300	0.62	+1.3
1,710,091	+		RR42_RS28300	0.66	+0.7
1,710,091	+		RR42_RS28300	0.66	+0.4
1,710,091	+		RR42_RS28300	0.66	+1.1
1,710,091	+		RR42_RS28300	0.66	+0.6
1,710,092	-		RR42_RS28300	0.66	+0.4
1,710,092	-		RR42_RS28300	0.66	+1.0
1,710,167	-		RR42_RS28300	0.74	-0.6
1,710,248	-		RR42_RS28300	0.82	+0.3
1,710,482	+				-1.1
1,710,483	-				+0.7
1,710,529	-				+0.1
1,710,530	+				-0.2
1,710,530	+				-0.5
1,710,531	-				+0.5
1,710,531	-				+1.1
1,710,553	+				+0.2
1,710,638	+				+0.4
1,710,675	+				+0.1
1,710,676	-				-1.7
1,710,676	-				-0.9
1,710,898	-				+0.4
1,710,898	-				-1.3
1,710,898	-				-0.8
1,710,909	-				+0.1
1,711,075	+		RR42_RS28305	0.12	+0.5
1,711,075	+		RR42_RS28305	0.12	+1.4
1,711,136	-		RR42_RS28305	0.17	+0.2
1,711,165	+		RR42_RS28305	0.19	+1.0
1,711,270	+		RR42_RS28305	0.26	+1.0
1,711,271	-		RR42_RS28305	0.26	-0.5
1,711,337	-		RR42_RS28305	0.31	-1.9