Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12200

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
2,622,656	+		RR42_RS12195	0.25	-0.2
2,622,656	+		RR42_RS12195	0.25	-1.5
2,622,656	+		RR42_RS12195	0.25	+0.1
2,622,797	+		RR42_RS12195	0.46	+0.7
2,622,797	+		RR42_RS12195	0.46	-2.7
2,622,905	+		RR42_RS12195	0.62	-1.9
2,622,905	+		RR42_RS12195	0.62	+0.1
2,622,906	-		RR42_RS12195	0.62	-0.4
2,622,959	+		RR42_RS12195	0.70	-0.5
2,622,960	-		RR42_RS12195	0.70	+1.4
2,623,031	+		RR42_RS12195	0.81	+0.6
2,623,032	-		RR42_RS12195	0.81	-1.2
2,623,032	-		RR42_RS12195	0.81	-0.0
2,623,359	+				+0.8
2,623,359	+				+0.4
2,623,388	-				-0.4
2,623,396	+				-0.5
2,623,490	+				+0.3
2,623,491	-				-1.0
2,623,686	-				+0.8
2,623,779	+		RR42_RS12200	0.15	+0.3
2,623,779	+		RR42_RS12200	0.15	+0.2
2,623,780	-		RR42_RS12200	0.15	+0.2
2,623,780	-		RR42_RS12200	0.15	+0.1
2,623,780	-		RR42_RS12200	0.15	-0.3
2,623,794	-		RR42_RS12200	0.16	-0.6
2,623,794	-		RR42_RS12200	0.16	+0.8
2,623,799	+		RR42_RS12200	0.17	-0.5
2,623,820	+		RR42_RS12200	0.18	-0.0
2,623,952	+		RR42_RS12200	0.29	-0.8
2,623,953	-		RR42_RS12200	0.29	+1.8
2,623,953	-		RR42_RS12200	0.29	-1.7
2,623,953	-		RR42_RS12200	0.29	-0.7
2,624,063	+		RR42_RS12200	0.37	+0.1
2,624,111	+		RR42_RS12200	0.41	-0.2
2,624,567	+		RR42_RS12200	0.76	+0.2
2,624,618	+		RR42_RS12200	0.80	-0.3
2,624,618	+		RR42_RS12200	0.80	+0.6
2,624,618	+		RR42_RS12200	0.80	-0.1
2,624,618	+		RR42_RS12200	0.80	+0.2
2,624,618	+		RR42_RS12200	0.80	+0.7
2,624,619	-		RR42_RS12200	0.80	+0.1
2,624,619	-		RR42_RS12200	0.80	+0.6
2,624,619	-		RR42_RS12200	0.80	+1.4
2,624,796	-				+0.3
2,624,796	-				-0.7
2,624,796	-				-0.0
2,624,892	+				-1.3
2,624,914	-				-0.3
2,625,432	+		RR42_RS12205	0.21	-0.6
2,625,511	+		RR42_RS12205	0.29	+0.8
2,625,511	+		RR42_RS12205	0.29	-0.7
2,625,512	-		RR42_RS12205	0.30	-1.1
2,625,512	-		RR42_RS12205	0.30	+0.8
2,625,639	-		RR42_RS12205	0.43	-0.3
2,625,667	+		RR42_RS12205	0.46	-1.2
2,625,668	-		RR42_RS12205	0.46	-1.3
2,625,668	-		RR42_RS12205	0.46	+0.2
2,625,669	+		RR42_RS12205	0.46	+0.8
2,625,669	+		RR42_RS12205	0.46	-0.5
2,625,669	+		RR42_RS12205	0.46	-0.4
2,625,669	+		RR42_RS12205	0.46	-0.5
2,625,669	+		RR42_RS12205	0.46	-0.4
2,625,669	+		RR42_RS12205	0.46	-1.2
2,625,669	+		RR42_RS12205	0.46	-0.2
2,625,670	-		RR42_RS12205	0.46	+0.6
2,625,670	-		RR42_RS12205	0.46	-0.7
2,625,670	-		RR42_RS12205	0.46	+0.3
2,625,670	-		RR42_RS12205	0.46	-1.0
2,625,670	-		RR42_RS12205	0.46	-1.6
2,625,670	-		RR42_RS12205	0.46	+0.2
2,625,670	-		RR42_RS12205	0.46	+0.3
2,625,670	-		RR42_RS12205	0.46	-0.8
2,625,675	+		RR42_RS12205	0.47	-0.2
2,625,675	+		RR42_RS12205	0.47	-1.2
2,625,675	+		RR42_RS12205	0.47	+0.2
2,625,676	-		RR42_RS12205	0.47	+0.1
2,625,676	-		RR42_RS12205	0.47	-1.0
2,625,787	+		RR42_RS12205	0.58	-1.2
2,625,787	+		RR42_RS12205	0.58	-0.2
2,625,787	+		RR42_RS12205	0.58	-0.9
2,625,788	-		RR42_RS12205	0.58	-0.4
2,625,788	-		RR42_RS12205	0.58	-0.3
2,625,788	-		RR42_RS12205	0.58	+0.0
2,625,788	-		RR42_RS12205	0.58	-0.3
2,625,788	-		RR42_RS12205	0.58	-1.5
2,625,788	-		RR42_RS12205	0.58	-0.2
2,625,789	+		RR42_RS12205	0.58	-0.0
2,625,790	-		RR42_RS12205	0.58	+0.0
2,625,790	-		RR42_RS12205	0.58	-0.4
2,625,790	-		RR42_RS12205	0.58	-0.3
2,625,790	-		RR42_RS12205	0.58	+2.4