Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09545

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
2,021,914	-		RR42_RS09535	0.89	-0.1
2,022,170	-				-0.6
2,022,185	+				-0.5
2,022,185	+				+0.0
2,022,287	+				+0.4
2,022,338	+				-0.3
2,022,339	-				+0.4
2,022,339	-				+0.0
2,022,339	-				-0.1
2,022,435	+		RR42_RS09540	0.27	+0.3
2,022,435	+		RR42_RS09540	0.27	-0.1
2,022,436	-		RR42_RS09540	0.27	-0.0
2,022,445	-		RR42_RS09540	0.28	-0.4
2,022,445	-		RR42_RS09540	0.28	-0.6
2,022,575	-		RR42_RS09540	0.52	-0.3
2,022,674	+		RR42_RS09540	0.69	-0.9
2,022,675	-		RR42_RS09540	0.69	-0.4
2,022,882	+				+0.3
2,022,883	-				-1.4
2,022,883	-				+0.3
2,022,969	+				-0.1
2,022,969	+				+0.7
2,022,970	-				-0.6
2,022,970	-				-0.7
2,022,970	-				+0.0
2,022,973	+				-0.2
2,023,024	-				+0.2
2,023,233	+		RR42_RS09545	0.22	-0.7
2,023,233	+		RR42_RS09545	0.22	-0.2
2,023,234	-		RR42_RS09545	0.22	+0.4
2,023,234	-		RR42_RS09545	0.22	-0.3
2,023,305	-		RR42_RS09545	0.27	-0.2
2,023,305	-		RR42_RS09545	0.27	+0.0
2,023,473	+		RR42_RS09545	0.37	+0.9
2,023,526	-		RR42_RS09545	0.41	-1.1
2,023,812	+		RR42_RS09545	0.59	-0.5
2,023,813	-		RR42_RS09545	0.59	+0.2
2,023,813	-		RR42_RS09545	0.59	+0.7
2,023,890	+		RR42_RS09545	0.64	-0.8
2,023,891	-		RR42_RS09545	0.64	-0.1
2,024,166	+		RR42_RS09545	0.81	-0.7
2,024,167	-		RR42_RS09545	0.81	-1.1
2,024,878	+		RR42_RS09550	0.67	-0.9
2,024,878	+		RR42_RS09550	0.67	-0.2
2,024,878	+		RR42_RS09550	0.67	-0.3
2,024,878	+		RR42_RS09550	0.67	-1.8
2,024,878	+		RR42_RS09550	0.67	+0.5
2,024,878	+		RR42_RS09550	0.67	-0.1
2,024,879	-		RR42_RS09550	0.67	-1.0
2,024,900	+		RR42_RS09550	0.71	+0.2
2,024,920	+		RR42_RS09550	0.76	+0.0
2,024,920	+		RR42_RS09550	0.76	-0.5
2,024,920	+		RR42_RS09550	0.76	+0.5
2,024,931	+		RR42_RS09550	0.78	+0.5
2,024,932	-		RR42_RS09550	0.79	+0.5
2,024,932	-		RR42_RS09550	0.79	+0.4
2,024,980	-		RR42_RS09550	0.89	-0.4
2,024,980	-		RR42_RS09550	0.89	-0.3
2,025,016	-				-0.4
2,025,016	-				-0.6
2,025,025	+				-0.7
2,025,025	+				-1.1
2,025,025	+				-0.4
2,025,073	+				-0.4
2,025,111	+				-1.1
2,025,112	-				-0.5
2,025,112	-				+0.3
2,025,112	-				+0.6
2,025,132	+				+0.2
2,025,132	+				-2.8
2,025,133	-				+0.2
2,025,133	-				-0.8
2,025,133	-				+0.6
2,025,218	-				-0.4
2,025,244	+				-0.1
2,025,300	+				+0.3
2,025,300	+				+0.9
2,025,301	-				-0.7
2,025,309	+				-0.5
2,025,309	+				+1.0
2,025,310	-				-0.1
2,025,432	+		RR42_RS09555	0.25	+0.4
2,025,432	+		RR42_RS09555	0.25	+0.4
2,025,432	+		RR42_RS09555	0.25	-1.4