Experiment: R2A with Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS07660 and RR42_RS07665 are separated by 226 nucleotides
RR42_RS07660: RR42_RS07660 - phosphoserine phosphatase, at 1,641,037 to 1,641,891
_RS07660
RR42_RS07665: RR42_RS07665 - hypothetical protein, at 1,642,118 to 1,642,414
_RS07665
Position (kb)
1642
1643 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1641.970 kb on - strand at 1641.974 kb on + strand at 1641.974 kb on + strand at 1641.974 kb on + strand at 1641.974 kb on + strand at 1641.974 kb on + strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.975 kb on - strand at 1641.976 kb on + strand at 1641.976 kb on + strand at 1641.977 kb on - strand at 1642.057 kb on + strand at 1642.057 kb on + strand at 1642.057 kb on + strand at 1642.058 kb on - strand at 1642.110 kb on - strand at 1642.110 kb on - strand at 1642.119 kb on + strand at 1642.120 kb on - strand at 1642.277 kb on + strand, within RR42_RS07665 at 1642.277 kb on + strand, within RR42_RS07665 at 1642.277 kb on + strand, within RR42_RS07665 at 1642.278 kb on - strand, within RR42_RS07665 at 1642.278 kb on - strand, within RR42_RS07665 at 1642.621 kb on + strand at 1642.621 kb on + strand at 1642.621 kb on + strand at 1642.621 kb on + strand at 1642.622 kb on - strand at 1642.622 kb on - strand at 1642.622 kb on - strand at 1642.623 kb on + strand at 1642.624 kb on - strand at 1642.624 kb on - strand at 1642.624 kb on - strand at 1642.687 kb on + strand at 1642.777 kb on + strand at 1642.908 kb on + strand at 1642.908 kb on + strand at 1642.980 kb on + strand at 1643.011 kb on + strand at 1643.011 kb on + strand at 1643.036 kb on + strand at 1643.157 kb on + strand at 1643.192 kb on + strand at 1643.193 kb on - strand at 1643.251 kb on - strand at 1643.267 kb on - strand at 1643.376 kb on + strand at 1643.377 kb on - strand at 1643.377 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Bacitracin 0.5 mg/ml remove 1,641,970 - +0.2 1,641,974 + -0.9 1,641,974 + -1.8 1,641,974 + -0.1 1,641,974 + +0.1 1,641,974 + -0.1 1,641,975 - -0.0 1,641,975 - +2.0 1,641,975 - -0.2 1,641,975 - +0.1 1,641,975 - -0.6 1,641,975 - -0.3 1,641,975 - +0.3 1,641,975 - -0.0 1,641,975 - +0.2 1,641,975 - -0.2 1,641,975 - -0.3 1,641,976 + -0.5 1,641,976 + -0.6 1,641,977 - -0.2 1,642,057 + +0.8 1,642,057 + -0.9 1,642,057 + -0.8 1,642,058 - -0.7 1,642,110 - -2.5 1,642,110 - -0.7 1,642,119 + +0.1 1,642,120 - -0.3 1,642,277 + RR42_RS07665 0.54 -0.7 1,642,277 + RR42_RS07665 0.54 +0.1 1,642,277 + RR42_RS07665 0.54 +0.1 1,642,278 - RR42_RS07665 0.54 -0.9 1,642,278 - RR42_RS07665 0.54 -1.4 1,642,621 + +0.1 1,642,621 + +0.2 1,642,621 + -0.5 1,642,621 + -0.3 1,642,622 - -2.8 1,642,622 - -0.1 1,642,622 - -0.1 1,642,623 + -0.1 1,642,624 - -0.3 1,642,624 - +0.1 1,642,624 - -0.4 1,642,687 + -0.3 1,642,777 + +0.4 1,642,908 + +1.0 1,642,908 + -0.1 1,642,980 + +2.1 1,643,011 + +2.2 1,643,011 + +1.1 1,643,036 + +0.1 1,643,157 + -0.9 1,643,192 + -0.0 1,643,193 - +0.3 1,643,251 - +0.2 1,643,267 - -0.3 1,643,376 + -0.7 1,643,377 - +1.6 1,643,377 - -0.3
Or see this region's nucleotide sequence