Experiment: R2A with Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03460 and RR42_RS03465 are separated by 207 nucleotides RR42_RS03465 and RR42_RS03470 are separated by 6 nucleotides
RR42_RS03460: RR42_RS03460 - tetraacyldisaccharide 4'-kinase, at 767,784 to 768,893
_RS03460
RR42_RS03465: RR42_RS03465 - biopolymer transporter ExbD, at 769,101 to 769,529
_RS03465
RR42_RS03470: RR42_RS03470 - flagellar motor protein MotA, at 769,536 to 770,156
_RS03470
Position (kb) 769
770
771 Strain fitness (log2 ratio) -2
-1
0
1 at 768.903 kb on - strand at 768.903 kb on - strand at 769.047 kb on - strand at 769.318 kb on + strand, within RR42_RS03465 at 769.318 kb on + strand, within RR42_RS03465 at 769.319 kb on - strand, within RR42_RS03465 at 769.319 kb on - strand, within RR42_RS03465 at 769.413 kb on - strand, within RR42_RS03465 at 769.424 kb on - strand, within RR42_RS03465 at 769.534 kb on + strand at 769.535 kb on - strand at 769.535 kb on - strand at 769.603 kb on + strand, within RR42_RS03470 at 769.603 kb on + strand, within RR42_RS03470 at 769.603 kb on + strand, within RR42_RS03470 at 769.604 kb on - strand, within RR42_RS03470 at 769.604 kb on - strand, within RR42_RS03470 at 769.604 kb on - strand, within RR42_RS03470 at 769.604 kb on - strand, within RR42_RS03470 at 769.627 kb on + strand, within RR42_RS03470 at 769.628 kb on - strand, within RR42_RS03470 at 769.679 kb on + strand, within RR42_RS03470 at 769.679 kb on + strand, within RR42_RS03470 at 769.680 kb on - strand, within RR42_RS03470 at 769.680 kb on - strand, within RR42_RS03470 at 769.681 kb on + strand, within RR42_RS03470 at 769.682 kb on - strand, within RR42_RS03470 at 769.682 kb on - strand, within RR42_RS03470 at 769.682 kb on - strand, within RR42_RS03470 at 769.682 kb on - strand, within RR42_RS03470 at 769.682 kb on - strand, within RR42_RS03470 at 769.898 kb on + strand, within RR42_RS03470 at 769.898 kb on + strand, within RR42_RS03470 at 769.898 kb on + strand, within RR42_RS03470 at 769.899 kb on - strand, within RR42_RS03470 at 770.257 kb on + strand at 770.258 kb on - strand at 770.319 kb on + strand at 770.526 kb on - strand at 770.534 kb on + strand at 770.534 kb on + strand at 770.588 kb on - strand at 770.612 kb on - strand at 770.624 kb on + strand at 770.770 kb on + strand at 770.946 kb on - strand at 771.058 kb on + strand at 771.058 kb on + strand at 771.137 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Bacitracin 0.5 mg/ml remove 768,903 - -0.4 768,903 - -0.2 769,047 - -0.3 769,318 + RR42_RS03465 0.51 -1.6 769,318 + RR42_RS03465 0.51 +0.3 769,319 - RR42_RS03465 0.51 -1.0 769,319 - RR42_RS03465 0.51 -0.5 769,413 - RR42_RS03465 0.73 -0.9 769,424 - RR42_RS03465 0.75 +1.1 769,534 + +0.7 769,535 - -1.1 769,535 - +0.3 769,603 + RR42_RS03470 0.11 -0.1 769,603 + RR42_RS03470 0.11 +0.4 769,603 + RR42_RS03470 0.11 -0.9 769,604 - RR42_RS03470 0.11 -0.7 769,604 - RR42_RS03470 0.11 -0.7 769,604 - RR42_RS03470 0.11 -0.5 769,604 - RR42_RS03470 0.11 -0.1 769,627 + RR42_RS03470 0.15 -1.2 769,628 - RR42_RS03470 0.15 -0.0 769,679 + RR42_RS03470 0.23 -0.4 769,679 + RR42_RS03470 0.23 -0.5 769,680 - RR42_RS03470 0.23 -0.1 769,680 - RR42_RS03470 0.23 -1.8 769,681 + RR42_RS03470 0.23 +0.7 769,682 - RR42_RS03470 0.24 -0.4 769,682 - RR42_RS03470 0.24 -0.9 769,682 - RR42_RS03470 0.24 -1.1 769,682 - RR42_RS03470 0.24 -0.4 769,682 - RR42_RS03470 0.24 +0.8 769,898 + RR42_RS03470 0.58 -0.7 769,898 + RR42_RS03470 0.58 -1.2 769,898 + RR42_RS03470 0.58 -1.7 769,899 - RR42_RS03470 0.58 +0.3 770,257 + -0.7 770,258 - -0.9 770,319 + +1.3 770,526 - -0.8 770,534 + -1.3 770,534 + -1.1 770,588 - +0.4 770,612 - -0.7 770,624 + -0.1 770,770 + -1.5 770,946 - -0.9 771,058 + -0.8 771,058 + -0.2 771,137 - +1.1
Or see this region's nucleotide sequence