Experiment: ALP with Nickel (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1470 and Dsui_1471 are separated by 56 nucleotides Dsui_1471 and Dsui_1472 are separated by 4 nucleotides Dsui_1472 and Dsui_1473 are separated by 118 nucleotides
Dsui_1470: Dsui_1470 - pantoate--beta-alanine ligase, at 1,533,285 to 1,534,109
_1470
Dsui_1471: Dsui_1471 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 1,534,166 to 1,534,978
_1471
Dsui_1472: Dsui_1472 - deoxynucleoside kinase, at 1,534,983 to 1,535,657
_1472
Dsui_1473: Dsui_1473 - methyl-accepting chemotaxis protein, at 1,535,776 to 1,536,906
_1473
Position (kb)
1534
1535
1536 Strain fitness (log2 ratio)
-1
0
1 at 1534.139 kb on - strand at 1534.175 kb on - strand at 1534.175 kb on - strand at 1535.159 kb on + strand, within Dsui_1472 at 1535.279 kb on + strand, within Dsui_1472 at 1535.303 kb on + strand, within Dsui_1472 at 1535.389 kb on - strand, within Dsui_1472 at 1535.466 kb on + strand, within Dsui_1472 at 1535.536 kb on - strand, within Dsui_1472 at 1535.781 kb on + strand at 1535.789 kb on - strand at 1535.828 kb on - strand at 1535.946 kb on + strand, within Dsui_1473 at 1535.988 kb on + strand, within Dsui_1473 at 1535.993 kb on - strand at 1535.998 kb on + strand, within Dsui_1473 at 1536.004 kb on + strand, within Dsui_1473 at 1536.102 kb on + strand, within Dsui_1473 at 1536.102 kb on + strand, within Dsui_1473 at 1536.102 kb on - strand, within Dsui_1473 at 1536.102 kb on - strand, within Dsui_1473 at 1536.110 kb on - strand, within Dsui_1473 at 1536.110 kb on - strand, within Dsui_1473 at 1536.136 kb on - strand, within Dsui_1473 at 1536.159 kb on - strand, within Dsui_1473 at 1536.250 kb on + strand, within Dsui_1473 at 1536.273 kb on + strand, within Dsui_1473 at 1536.311 kb on + strand, within Dsui_1473 at 1536.480 kb on + strand, within Dsui_1473 at 1536.488 kb on - strand, within Dsui_1473 at 1536.531 kb on + strand, within Dsui_1473 at 1536.531 kb on + strand, within Dsui_1473 at 1536.598 kb on - strand, within Dsui_1473 at 1536.625 kb on + strand, within Dsui_1473
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 2.5 mM remove 1,534,139 - -0.2 1,534,175 - +0.2 1,534,175 - +0.2 1,535,159 + Dsui_1472 0.26 -0.8 1,535,279 + Dsui_1472 0.44 -0.0 1,535,303 + Dsui_1472 0.47 -0.0 1,535,389 - Dsui_1472 0.60 -0.5 1,535,466 + Dsui_1472 0.72 +1.0 1,535,536 - Dsui_1472 0.82 -0.7 1,535,781 + -0.0 1,535,789 - -0.0 1,535,828 - -1.0 1,535,946 + Dsui_1473 0.15 -0.1 1,535,988 + Dsui_1473 0.19 -0.6 1,535,993 - +0.9 1,535,998 + Dsui_1473 0.20 +0.9 1,536,004 + Dsui_1473 0.20 -1.1 1,536,102 + Dsui_1473 0.29 +0.9 1,536,102 + Dsui_1473 0.29 -0.6 1,536,102 - Dsui_1473 0.29 -0.3 1,536,102 - Dsui_1473 0.29 -0.6 1,536,110 - Dsui_1473 0.30 +0.9 1,536,110 - Dsui_1473 0.30 -0.6 1,536,136 - Dsui_1473 0.32 +0.9 1,536,159 - Dsui_1473 0.34 -0.1 1,536,250 + Dsui_1473 0.42 -1.1 1,536,273 + Dsui_1473 0.44 +0.9 1,536,311 + Dsui_1473 0.47 -0.1 1,536,480 + Dsui_1473 0.62 +0.9 1,536,488 - Dsui_1473 0.63 -0.1 1,536,531 + Dsui_1473 0.67 +0.9 1,536,531 + Dsui_1473 0.67 +0.9 1,536,598 - Dsui_1473 0.73 -0.6 1,536,625 + Dsui_1473 0.75 +0.9
Or see this region's nucleotide sequence