Experiment: ALP with Nickel (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1375 and Dsui_1376 are separated by 131 nucleotides Dsui_1376 and Dsui_1377 are separated by 218 nucleotides Dsui_1377 and Dsui_1378 are separated by 281 nucleotides
Dsui_1375: Dsui_1375 - putative nuleotide-utilizing enzyme, moeA, at 1,432,011 to 1,432,799
_1375
Dsui_1376: Dsui_1376 - phasin family protein, at 1,432,931 to 1,433,488
_1376
Dsui_1377: Dsui_1377 - phasin family protein, at 1,433,707 to 1,434,282
_1377
Dsui_1378: Dsui_1378 - enoyl-CoA hydratase/carnithine racemase, at 1,434,564 to 1,435,340
_1378
Position (kb)
1433
1434
1435 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1432.823 kb on + strand at 1432.900 kb on - strand at 1433.089 kb on - strand, within Dsui_1376 at 1433.164 kb on + strand, within Dsui_1376 at 1433.245 kb on - strand, within Dsui_1376 at 1433.252 kb on - strand, within Dsui_1376 at 1433.269 kb on + strand, within Dsui_1376 at 1433.278 kb on - strand, within Dsui_1376 at 1433.285 kb on - strand, within Dsui_1376 at 1433.323 kb on + strand, within Dsui_1376 at 1433.410 kb on - strand, within Dsui_1376 at 1433.412 kb on + strand, within Dsui_1376 at 1433.412 kb on + strand, within Dsui_1376 at 1433.419 kb on - strand, within Dsui_1376 at 1433.419 kb on - strand, within Dsui_1376 at 1433.420 kb on - strand, within Dsui_1376 at 1433.457 kb on + strand at 1433.457 kb on + strand at 1433.457 kb on + strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.495 kb on + strand at 1433.507 kb on + strand at 1433.522 kb on - strand at 1433.531 kb on - strand at 1433.531 kb on - strand at 1433.570 kb on + strand at 1433.570 kb on + strand at 1433.621 kb on - strand at 1433.621 kb on - strand at 1433.648 kb on + strand at 1433.704 kb on + strand at 1433.814 kb on + strand, within Dsui_1377 at 1434.050 kb on + strand, within Dsui_1377 at 1434.058 kb on - strand, within Dsui_1377 at 1434.070 kb on + strand at 1434.116 kb on + strand at 1434.124 kb on - strand, within Dsui_1377 at 1434.258 kb on + strand at 1434.266 kb on - strand at 1434.285 kb on - strand at 1434.299 kb on - strand at 1434.299 kb on - strand at 1434.572 kb on + strand at 1434.583 kb on + strand at 1434.673 kb on + strand, within Dsui_1378 at 1434.674 kb on - strand, within Dsui_1378 at 1434.796 kb on + strand, within Dsui_1378 at 1434.864 kb on - strand, within Dsui_1378 at 1434.874 kb on + strand, within Dsui_1378 at 1434.874 kb on + strand, within Dsui_1378 at 1434.874 kb on + strand, within Dsui_1378 at 1434.882 kb on - strand, within Dsui_1378 at 1434.883 kb on - strand, within Dsui_1378 at 1434.936 kb on - strand, within Dsui_1378 at 1434.961 kb on - strand, within Dsui_1378 at 1435.030 kb on - strand, within Dsui_1378 at 1435.099 kb on + strand, within Dsui_1378 at 1435.127 kb on - strand, within Dsui_1378
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 2.5 mM remove 1,432,823 + -0.1 1,432,900 - -0.5 1,433,089 - Dsui_1376 0.28 -0.6 1,433,164 + Dsui_1376 0.42 +0.4 1,433,245 - Dsui_1376 0.56 +0.2 1,433,252 - Dsui_1376 0.58 +0.4 1,433,269 + Dsui_1376 0.61 -1.2 1,433,278 - Dsui_1376 0.62 -0.7 1,433,285 - Dsui_1376 0.63 +0.1 1,433,323 + Dsui_1376 0.70 -0.7 1,433,410 - Dsui_1376 0.86 +0.5 1,433,412 + Dsui_1376 0.86 +0.7 1,433,412 + Dsui_1376 0.86 -0.1 1,433,419 - Dsui_1376 0.87 -0.1 1,433,419 - Dsui_1376 0.87 -0.2 1,433,420 - Dsui_1376 0.88 +0.2 1,433,457 + +0.6 1,433,457 + -0.7 1,433,457 + -3.2 1,433,465 - -0.9 1,433,465 - +0.3 1,433,465 - -0.4 1,433,465 - +0.3 1,433,495 + -2.3 1,433,507 + -1.6 1,433,522 - +0.2 1,433,531 - -0.7 1,433,531 - -0.7 1,433,570 + -0.9 1,433,570 + -1.1 1,433,621 - +0.1 1,433,621 - -0.2 1,433,648 + -0.5 1,433,704 + +1.9 1,433,814 + Dsui_1377 0.19 -0.7 1,434,050 + Dsui_1377 0.60 +0.9 1,434,058 - Dsui_1377 0.61 +1.4 1,434,070 + +0.9 1,434,116 + +0.9 1,434,124 - Dsui_1377 0.72 +1.6 1,434,258 + +0.9 1,434,266 - +1.7 1,434,285 - +0.8 1,434,299 - +1.2 1,434,299 - +1.2 1,434,572 + -0.1 1,434,583 + +0.9 1,434,673 + Dsui_1378 0.14 +0.9 1,434,674 - Dsui_1378 0.14 -0.0 1,434,796 + Dsui_1378 0.30 -0.1 1,434,864 - Dsui_1378 0.39 -0.3 1,434,874 + Dsui_1378 0.40 +0.9 1,434,874 + Dsui_1378 0.40 -1.9 1,434,874 + Dsui_1378 0.40 -0.1 1,434,882 - Dsui_1378 0.41 -0.3 1,434,883 - Dsui_1378 0.41 -0.1 1,434,936 - Dsui_1378 0.48 -0.2 1,434,961 - Dsui_1378 0.51 -0.2 1,435,030 - Dsui_1378 0.60 -0.2 1,435,099 + Dsui_1378 0.69 -0.1 1,435,127 - Dsui_1378 0.72 -0.2
Or see this region's nucleotide sequence