Strain Fitness in Dechlorosoma suillum PS around Dsui_0996

Experiment: ALP with Nickel (II) chloride 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0995 and Dsui_0996 are separated by 75 nucleotidesDsui_0996 and Dsui_0997 are separated by 366 nucleotides Dsui_0995: Dsui_0995 - arabinose efflux permease family protein, at 1,020,976 to 1,022,196 _0995 Dsui_0996: Dsui_0996 - soluble lytic murein transglycosylase-like protein, at 1,022,272 to 1,022,979 _0996 Dsui_0997: Dsui_0997 - methyl-accepting chemotaxis protein, at 1,023,346 to 1,025,373 _0997 Position (kb) 1022 1023Strain fitness (log2 ratio) -3 -2 -1 0 1at 1021.389 kb on + strand, within Dsui_0995at 1021.476 kb on - strand, within Dsui_0995at 1021.640 kb on + strand, within Dsui_0995at 1021.648 kb on - strand, within Dsui_0995at 1021.648 kb on - strandat 1021.696 kb on - strandat 1021.811 kb on - strand, within Dsui_0995at 1021.971 kb on - strand, within Dsui_0995at 1022.011 kb on + strand, within Dsui_0995at 1022.050 kb on + strand, within Dsui_0995at 1022.123 kb on + strandat 1022.131 kb on - strandat 1022.159 kb on - strandat 1022.185 kb on + strandat 1022.239 kb on + strandat 1022.339 kb on + strandat 1022.344 kb on + strand, within Dsui_0996at 1022.552 kb on + strand, within Dsui_0996at 1022.643 kb on - strand, within Dsui_0996at 1022.701 kb on + strand, within Dsui_0996at 1022.701 kb on + strand, within Dsui_0996at 1022.709 kb on - strand, within Dsui_0996at 1022.901 kb on + strand, within Dsui_0996at 1022.906 kb on + strand, within Dsui_0996at 1022.909 kb on - strandat 1022.919 kb on - strandat 1023.015 kb on + strandat 1023.034 kb on - strandat 1023.121 kb on + strandat 1023.131 kb on + strandat 1023.132 kb on + strandat 1023.133 kb on + strandat 1023.141 kb on - strandat 1023.232 kb on + strandat 1023.232 kb on + strandat 1023.240 kb on - strandat 1023.341 kb on - strandat 1023.352 kb on - strandat 1023.392 kb on + strandat 1023.416 kb on + strandat 1023.424 kb on - strandat 1023.494 kb on + strandat 1023.502 kb on - strandat 1023.504 kb on + strandat 1023.651 kb on - strand, within Dsui_0997at 1023.655 kb on + strand, within Dsui_0997at 1023.663 kb on - strand, within Dsui_0997at 1023.725 kb on - strand, within Dsui_0997at 1023.963 kb on + strand, within Dsui_0997

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 2.5 mM
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1,021,389 + Dsui_0995 0.34 -0.2
1,021,476 - Dsui_0995 0.41 -0.2
1,021,640 + Dsui_0995 0.54 +0.1
1,021,648 - Dsui_0995 0.55 -1.5
1,021,648 - -0.6
1,021,696 - -1.0
1,021,811 - Dsui_0995 0.68 -3.7
1,021,971 - Dsui_0995 0.81 -1.2
1,022,011 + Dsui_0995 0.85 +0.0
1,022,050 + Dsui_0995 0.88 -0.3
1,022,123 + -0.7
1,022,131 - +0.4
1,022,159 - -1.8
1,022,185 + +0.5
1,022,239 + -1.0
1,022,339 + -0.1
1,022,344 + Dsui_0996 0.10 +0.5
1,022,552 + Dsui_0996 0.40 +1.0
1,022,643 - Dsui_0996 0.52 +0.3
1,022,701 + Dsui_0996 0.61 -1.6
1,022,701 + Dsui_0996 0.61 -1.6
1,022,709 - Dsui_0996 0.62 +0.1
1,022,901 + Dsui_0996 0.89 +1.0
1,022,906 + Dsui_0996 0.90 +0.0
1,022,909 - -0.0
1,022,919 - +0.3
1,023,015 + +1.0
1,023,034 - +0.5
1,023,121 + -0.6
1,023,131 + -1.3
1,023,132 + -2.4
1,023,133 + -1.6
1,023,141 - +0.4
1,023,232 + +0.0
1,023,232 + -1.0
1,023,240 - +1.0
1,023,341 - -2.0
1,023,352 - -1.3
1,023,392 + -3.3
1,023,416 + +1.0
1,023,424 - -2.3
1,023,494 + -1.8
1,023,502 - -1.0
1,023,504 + +0.0
1,023,651 - Dsui_0997 0.15 +0.4
1,023,655 + Dsui_0997 0.15 +1.0
1,023,663 - Dsui_0997 0.16 -2.3
1,023,725 - Dsui_0997 0.19 -1.2
1,023,963 + Dsui_0997 0.30 +1.0

Or see this region's nucleotide sequence