Experiment: ALP with Nickel (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0977 and Dsui_0978 are separated by 87 nucleotides Dsui_0978 and Dsui_0979 are separated by 116 nucleotides Dsui_0979 and Dsui_0980 are separated by 132 nucleotides
Dsui_0977: Dsui_0977 - acyl-CoA dehydrogenase, at 1,003,640 to 1,004,776
_0977
Dsui_0978: Dsui_0978 - 2-hydroxychromene-2-carboxylate isomerase, at 1,004,864 to 1,005,466
_0978
Dsui_0979: Dsui_0979 - TIGR00730 family protein, at 1,005,583 to 1,006,167
_0979
Dsui_0980: Dsui_0980 - acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 1,006,300 to 1,007,907
_0980
Position (kb)
1005
1006
1007 Strain fitness (log2 ratio)
-2
-1
0
1 at 1004.641 kb on + strand, within Dsui_0977 at 1004.657 kb on + strand, within Dsui_0977 at 1004.762 kb on - strand at 1004.778 kb on - strand at 1004.829 kb on + strand at 1004.829 kb on + strand at 1004.996 kb on - strand, within Dsui_0978 at 1005.128 kb on - strand, within Dsui_0978 at 1005.178 kb on + strand, within Dsui_0978 at 1005.222 kb on - strand, within Dsui_0978 at 1005.414 kb on - strand at 1005.540 kb on + strand at 1005.670 kb on + strand, within Dsui_0979 at 1005.848 kb on + strand, within Dsui_0979 at 1005.939 kb on - strand, within Dsui_0979 at 1006.064 kb on + strand, within Dsui_0979 at 1006.068 kb on + strand, within Dsui_0979 at 1006.106 kb on - strand, within Dsui_0979 at 1006.416 kb on - strand at 1006.488 kb on + strand, within Dsui_0980 at 1006.613 kb on - strand, within Dsui_0980 at 1006.646 kb on - strand, within Dsui_0980 at 1006.653 kb on + strand, within Dsui_0980 at 1006.715 kb on + strand, within Dsui_0980 at 1006.721 kb on + strand, within Dsui_0980 at 1006.723 kb on - strand at 1006.799 kb on + strand, within Dsui_0980 at 1006.799 kb on + strand, within Dsui_0980 at 1006.822 kb on + strand, within Dsui_0980 at 1006.830 kb on - strand at 1006.900 kb on - strand, within Dsui_0980
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 2.5 mM remove 1,004,641 + Dsui_0977 0.88 -1.6 1,004,657 + Dsui_0977 0.89 +0.0 1,004,762 - +1.0 1,004,778 - +1.0 1,004,829 + -1.8 1,004,829 + +1.0 1,004,996 - Dsui_0978 0.22 +1.0 1,005,128 - Dsui_0978 0.44 +0.0 1,005,178 + Dsui_0978 0.52 -1.6 1,005,222 - Dsui_0978 0.59 -1.6 1,005,414 - +0.0 1,005,540 + -1.0 1,005,670 + Dsui_0979 0.15 -0.9 1,005,848 + Dsui_0979 0.45 -1.3 1,005,939 - Dsui_0979 0.61 +1.0 1,006,064 + Dsui_0979 0.82 +0.9 1,006,068 + Dsui_0979 0.83 -0.5 1,006,106 - Dsui_0979 0.89 +1.0 1,006,416 - +0.0 1,006,488 + Dsui_0980 0.12 -0.5 1,006,613 - Dsui_0980 0.19 -2.0 1,006,646 - Dsui_0980 0.22 -1.0 1,006,653 + Dsui_0980 0.22 -2.3 1,006,715 + Dsui_0980 0.26 +0.5 1,006,721 + Dsui_0980 0.26 -1.8 1,006,723 - +1.0 1,006,799 + Dsui_0980 0.31 -0.8 1,006,799 + Dsui_0980 0.31 -1.6 1,006,822 + Dsui_0980 0.32 +1.0 1,006,830 - +1.0 1,006,900 - Dsui_0980 0.37 -1.3
Or see this region's nucleotide sequence