Experiment: ALP with Nickel (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0730 and Dsui_0731 are separated by 18 nucleotides Dsui_0731 and Dsui_0732 are separated by 12 nucleotides Dsui_0732 and Dsui_0733 are separated by 12 nucleotides Dsui_0733 and Dsui_0734 overlap by 4 nucleotides
Dsui_0730: Dsui_0730 - microcystin-dependent protein, at 728,754 to 729,293
_0730
Dsui_0731: Dsui_0731 - microcystin-dependent protein, at 729,312 to 729,833
_0731
Dsui_0732: Dsui_0732 - microcystin-dependent protein, at 729,846 to 730,379
_0732
Dsui_0733: Dsui_0733 - hypothetical protein, at 730,392 to 730,703
_0733
Dsui_0734: Dsui_0734 - acetyltransferase, at 730,700 to 731,239
_0734
Position (kb) 729
730
731 Strain fitness (log2 ratio) -2
-1
0
1 at 728.892 kb on + strand, within Dsui_0730 at 728.938 kb on + strand, within Dsui_0730 at 728.963 kb on + strand, within Dsui_0730 at 728.971 kb on - strand, within Dsui_0730 at 728.987 kb on + strand, within Dsui_0730 at 728.998 kb on + strand, within Dsui_0730 at 729.157 kb on + strand, within Dsui_0730 at 729.165 kb on - strand, within Dsui_0730 at 729.297 kb on - strand at 729.346 kb on - strand at 729.381 kb on + strand, within Dsui_0731 at 729.393 kb on + strand, within Dsui_0731 at 729.412 kb on - strand, within Dsui_0731 at 729.426 kb on + strand, within Dsui_0731 at 729.435 kb on + strand, within Dsui_0731 at 729.440 kb on + strand, within Dsui_0731 at 729.547 kb on - strand, within Dsui_0731 at 729.553 kb on + strand, within Dsui_0731 at 729.591 kb on - strand, within Dsui_0731 at 729.616 kb on - strand, within Dsui_0731 at 729.632 kb on - strand, within Dsui_0731 at 729.656 kb on - strand, within Dsui_0731 at 729.663 kb on - strand, within Dsui_0731 at 729.728 kb on - strand, within Dsui_0731 at 729.760 kb on - strand, within Dsui_0731 at 729.772 kb on + strand, within Dsui_0731 at 729.777 kb on + strand, within Dsui_0731 at 729.837 kb on + strand at 729.906 kb on - strand, within Dsui_0732 at 730.012 kb on + strand, within Dsui_0732 at 730.020 kb on - strand, within Dsui_0732 at 730.097 kb on + strand, within Dsui_0732 at 730.131 kb on + strand at 730.134 kb on - strand, within Dsui_0732 at 730.152 kb on + strand, within Dsui_0732 at 730.152 kb on + strand, within Dsui_0732 at 730.160 kb on - strand, within Dsui_0732 at 730.196 kb on - strand, within Dsui_0732 at 730.204 kb on - strand, within Dsui_0732 at 730.211 kb on + strand, within Dsui_0732 at 730.219 kb on - strand, within Dsui_0732 at 730.223 kb on - strand, within Dsui_0732 at 730.316 kb on + strand, within Dsui_0732 at 730.316 kb on + strand at 730.318 kb on + strand, within Dsui_0732 at 730.324 kb on - strand, within Dsui_0732 at 730.324 kb on - strand, within Dsui_0732 at 730.324 kb on - strand, within Dsui_0732 at 730.325 kb on - strand, within Dsui_0732 at 730.333 kb on + strand at 730.398 kb on - strand at 730.498 kb on - strand, within Dsui_0733 at 730.524 kb on - strand, within Dsui_0733 at 730.551 kb on + strand, within Dsui_0733 at 730.559 kb on - strand, within Dsui_0733 at 730.607 kb on - strand, within Dsui_0733 at 730.644 kb on + strand, within Dsui_0733 at 730.657 kb on + strand at 730.707 kb on + strand at 730.707 kb on + strand at 730.728 kb on + strand at 730.865 kb on - strand, within Dsui_0734 at 731.030 kb on - strand, within Dsui_0734 at 731.080 kb on - strand, within Dsui_0734 at 731.202 kb on - strand at 731.202 kb on - strand at 731.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 2.5 mM remove 728,892 + Dsui_0730 0.26 -0.1 728,938 + Dsui_0730 0.34 -2.1 728,963 + Dsui_0730 0.39 +0.9 728,971 - Dsui_0730 0.40 -0.6 728,987 + Dsui_0730 0.43 -0.1 728,998 + Dsui_0730 0.45 +0.9 729,157 + Dsui_0730 0.75 -1.1 729,165 - Dsui_0730 0.76 +0.9 729,297 - +0.9 729,346 - +0.9 729,381 + Dsui_0731 0.13 -0.1 729,393 + Dsui_0731 0.16 +0.9 729,412 - Dsui_0731 0.19 -1.6 729,426 + Dsui_0731 0.22 +0.9 729,435 + Dsui_0731 0.24 -0.1 729,440 + Dsui_0731 0.25 -1.6 729,547 - Dsui_0731 0.45 +0.9 729,553 + Dsui_0731 0.46 +0.9 729,591 - Dsui_0731 0.53 -0.1 729,616 - Dsui_0731 0.58 -1.1 729,632 - Dsui_0731 0.61 -0.6 729,656 - Dsui_0731 0.66 -0.1 729,663 - Dsui_0731 0.67 -0.1 729,728 - Dsui_0731 0.80 +0.9 729,760 - Dsui_0731 0.86 -0.1 729,772 + Dsui_0731 0.88 -1.4 729,777 + Dsui_0731 0.89 +0.9 729,837 + +0.9 729,906 - Dsui_0732 0.11 +0.9 730,012 + Dsui_0732 0.31 +0.9 730,020 - Dsui_0732 0.33 +0.9 730,097 + Dsui_0732 0.47 -1.1 730,131 + -0.6 730,134 - Dsui_0732 0.54 -0.1 730,152 + Dsui_0732 0.57 -0.1 730,152 + Dsui_0732 0.57 -0.1 730,160 - Dsui_0732 0.59 +0.9 730,196 - Dsui_0732 0.66 -1.1 730,204 - Dsui_0732 0.67 +0.9 730,211 + Dsui_0732 0.68 +0.9 730,219 - Dsui_0732 0.70 -1.1 730,223 - Dsui_0732 0.71 -0.1 730,316 + Dsui_0732 0.88 +0.9 730,316 + +0.9 730,318 + Dsui_0732 0.88 -0.1 730,324 - Dsui_0732 0.90 +0.9 730,324 - Dsui_0732 0.90 +0.9 730,324 - Dsui_0732 0.90 +0.9 730,325 - Dsui_0732 0.90 +0.9 730,333 + -0.0 730,398 - -0.0 730,498 - Dsui_0733 0.34 -0.0 730,524 - Dsui_0733 0.42 +1.0 730,551 + Dsui_0733 0.51 +1.0 730,559 - Dsui_0733 0.54 +1.0 730,607 - Dsui_0733 0.69 +1.0 730,644 + Dsui_0733 0.81 -2.2 730,657 + +1.0 730,707 + +1.0 730,707 + -0.0 730,728 + -1.4 730,865 - Dsui_0734 0.31 -0.6 731,030 - Dsui_0734 0.61 -1.0 731,080 - Dsui_0734 0.70 -0.6 731,202 - +1.0 731,202 - -0.6 731,242 - -0.0
Or see this region's nucleotide sequence