Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28740

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
6,255,265	+		AO353_28735	0.10	-0.5
6,255,265	+		AO353_28735	0.10	-0.9
6,255,265	+		AO353_28735	0.10	-0.6
6,255,265	+		AO353_28735	0.10	+1.0
6,255,265	+		AO353_28735	0.10	-1.2
6,255,265	+		AO353_28735	0.10	-0.0
6,255,266	-		AO353_28735	0.10	-0.7
6,255,266	-		AO353_28735	0.10	+1.0
6,255,266	-		AO353_28735	0.10	+0.6
6,255,266	-		AO353_28735	0.10	-0.0
6,255,266	-		AO353_28735	0.10	-1.0
6,255,266	-		AO353_28735	0.10	-0.5
6,255,281	+		AO353_28735	0.12	-0.5
6,255,392	+		AO353_28735	0.22	-0.9
6,255,400	+		AO353_28735	0.22	-0.4
6,255,401	-		AO353_28735	0.22	-0.2
6,255,476	-		AO353_28735	0.29	+0.8
6,255,476	-		AO353_28735	0.29	+0.4
6,255,531	-		AO353_28735	0.34	-0.1
6,255,541	+		AO353_28735	0.35	+0.6
6,255,542	-		AO353_28735	0.35	-0.2
6,255,610	+		AO353_28735	0.41	-1.0
6,255,610	+		AO353_28735	0.41	+1.1
6,255,610	+		AO353_28735	0.41	-0.6
6,255,611	-		AO353_28735	0.41	-0.1
6,255,611	-		AO353_28735	0.41	+0.5
6,255,611	-		AO353_28735	0.41	+0.3
6,255,611	-		AO353_28735	0.41	-0.4
6,255,688	+		AO353_28735	0.48	+0.8
6,255,688	+		AO353_28735	0.48	-1.3
6,255,688	+		AO353_28735	0.48	+1.6
6,255,688	+		AO353_28735	0.48	-0.2
6,255,689	-		AO353_28735	0.49	+0.0
6,255,689	-		AO353_28735	0.49	-0.6
6,255,792	-		AO353_28735	0.58	-0.2
6,255,838	+		AO353_28735	0.62	+0.3
6,255,838	+		AO353_28735	0.62	+1.6
6,255,838	+		AO353_28735	0.62	-0.7
6,255,838	+		AO353_28735	0.62	+0.6
6,255,838	+		AO353_28735	0.62	+0.5
6,255,838	+		AO353_28735	0.62	-2.6
6,255,839	-		AO353_28735	0.62	-1.0
6,255,839	-		AO353_28735	0.62	-0.2
6,255,839	-		AO353_28735	0.62	+0.4
6,255,839	-		AO353_28735	0.62	-0.3
6,255,839	-		AO353_28735	0.62	+0.1
6,255,839	-		AO353_28735	0.62	-1.1
6,255,839	-		AO353_28735	0.62	-2.3
6,255,863	+		AO353_28735	0.64	+0.5
6,255,863	+		AO353_28735	0.64	-0.7
6,255,863	+		AO353_28735	0.64	+0.6
6,255,863	+		AO353_28735	0.64	+0.6
6,255,863	+		AO353_28735	0.64	-0.2
6,255,863	+		AO353_28735	0.64	-1.0
6,255,863	+		AO353_28735	0.64	-1.9
6,255,864	-		AO353_28735	0.64	+2.0
6,255,864	-		AO353_28735	0.64	-2.8
6,255,866	-		AO353_28735	0.65	-1.1
6,255,866	-		AO353_28735	0.65	+0.7
6,255,895	+		AO353_28735	0.67	+0.3
6,255,895	+		AO353_28735	0.67	-0.1
6,255,895	+		AO353_28735	0.67	+0.0
6,255,895	+		AO353_28735	0.67	-0.4
6,255,895	+		AO353_28735	0.67	-0.6
6,255,895	+		AO353_28735	0.67	+0.4
6,255,896	-		AO353_28735	0.67	+1.6
6,255,896	-		AO353_28735	0.67	+1.0
6,255,896	-		AO353_28735	0.67	-1.4
6,255,896	-		AO353_28735	0.67	+1.0
6,255,896	-		AO353_28735	0.67	-0.6
6,255,896	-		AO353_28735	0.67	+0.5
6,256,087	+		AO353_28735	0.85	-0.4
6,256,087	+		AO353_28735	0.85	-0.6
6,256,087	+		AO353_28735	0.85	-0.2
6,256,087	+		AO353_28735	0.85	+0.1
6,256,087	+		AO353_28735	0.85	-0.7
6,256,087	+		AO353_28735	0.85	-0.5
6,256,087	+		AO353_28735	0.85	-1.3
6,256,087	+		AO353_28735	0.85	+0.3
6,256,087	+		AO353_28735	0.85	-2.2
6,256,087	+		AO353_28735	0.85	-0.3
6,256,088	-		AO353_28735	0.85	-1.1
6,256,088	-		AO353_28735	0.85	-0.7
6,256,088	-		AO353_28735	0.85	+1.0
6,256,088	-		AO353_28735	0.85	-0.1
6,256,088	-		AO353_28735	0.85	-0.7
6,256,088	-		AO353_28735	0.85	-0.4
6,256,088	-				+1.6
6,256,088	-		AO353_28735	0.85	+0.6
6,256,088	-		AO353_28735	0.85	-1.7
6,256,088	-		AO353_28735	0.85	-0.6
6,256,088	-		AO353_28735	0.85	-0.6
6,256,088	-		AO353_28735	0.85	+0.4
6,256,145	-		AO353_28735	0.90	-0.2
6,256,159	+				-1.4
6,256,159	+				-0.6
6,256,159	+				-1.0
6,256,159	+				-0.3
6,256,159	+				-0.9
6,256,159	+				-1.4
6,256,159	+				+0.3
6,256,159	+				-1.3
6,256,159	+				-0.9
6,256,160	-				-0.9
6,256,160	-				-2.0
6,256,160	-				-2.2
6,256,160	-				-0.4
6,256,160	-				-1.5
6,256,309	+				+0.2
6,256,309	+				-2.2
6,256,322	+				+1.3
6,256,322	+				+0.8
6,256,322	+				-0.1
6,256,322	+				-0.2
6,256,323	-				-0.2
6,256,323	-				+1.6
6,256,323	-				-0.7
6,256,323	-				-1.0
6,256,323	-				-1.6
6,256,323	-				+0.5
6,256,323	-				-0.4
6,256,347	-				+0.8
6,256,347	-				-1.0
6,256,347	-				-0.9
6,256,461	+		AO353_28740	0.22	-1.6
6,256,462	-		AO353_28740	0.22	+0.8
6,256,475	+		AO353_28740	0.24	+1.6
6,256,475	+		AO353_28740	0.24	+0.5
6,256,778	+		AO353_28740	0.57	+0.6
6,256,778	+		AO353_28740	0.57	+0.3
6,256,779	-		AO353_28740	0.57	+0.4
6,256,779	-		AO353_28740	0.57	+1.0
6,256,779	-		AO353_28740	0.57	-1.4
6,256,779	-		AO353_28740	0.57	-0.7
6,256,810	+		AO353_28740	0.61	-0.0
6,256,811	-		AO353_28740	0.61	+0.1
6,256,811	-		AO353_28740	0.61	+0.4
6,256,877	+		AO353_28740	0.68	-0.1
6,256,877	+		AO353_28740	0.68	-0.9
6,256,877	+				+0.6
6,256,877	+		AO353_28740	0.68	-1.2
6,256,877	+		AO353_28740	0.68	-0.6
6,256,878	-		AO353_28740	0.68	-0.9
6,256,878	-		AO353_28740	0.68	-1.5
6,256,878	-		AO353_28740	0.68	-0.6
6,256,878	-		AO353_28740	0.68	+0.8
6,256,973	+		AO353_28740	0.79	-0.8
6,256,974	-		AO353_28740	0.79	+1.3
6,257,022	-		AO353_28740	0.84	-0.8
6,257,022	-		AO353_28740	0.84	-1.1
6,257,083	+				-0.8
6,257,084	-				+0.4
6,257,084	-				-1.6
6,257,145	+				-0.4
6,257,145	+				-1.6
6,257,145	+				+0.1
6,257,145	+				+0.4
6,257,145	+				+0.2
6,257,146	-				-0.6
6,257,146	-				-1.9
6,257,146	-				-0.6
6,257,146	-				+0.3
6,257,146	-				-0.2
6,257,146	-				-2.1
6,257,146	-				+0.8
6,257,152	-				-0.8
6,257,326	-		AO353_28745	0.15	+0.3
6,257,326	-		AO353_28745	0.15	-0.3
6,257,348	-		AO353_28745	0.17	-0.4
6,257,358	+		AO353_28745	0.18	+0.4
6,257,358	+		AO353_28745	0.18	-0.0
6,257,358	+		AO353_28745	0.18	+0.6
6,257,358	+		AO353_28745	0.18	-0.9
6,257,359	-		AO353_28745	0.18	+0.6
6,257,359	-		AO353_28745	0.18	-0.2
6,257,359	-		AO353_28745	0.18	+0.6
6,257,359	-		AO353_28745	0.18	-0.1
6,257,370	+		AO353_28745	0.19	-1.0
6,257,370	+		AO353_28745	0.19	-0.2
6,257,370	+		AO353_28745	0.19	-0.6
6,257,370	+		AO353_28745	0.19	-1.3
6,257,371	-		AO353_28745	0.19	-1.3
6,257,371	-		AO353_28745	0.19	+0.0
6,257,421	+		AO353_28745	0.24	-1.7
6,257,421	+		AO353_28745	0.24	-1.3
6,257,422	-		AO353_28745	0.24	-1.9
6,257,422	-		AO353_28745	0.24	+0.3
6,257,422	-		AO353_28745	0.24	+2.6
6,257,422	-		AO353_28745	0.24	-0.7
6,257,422	-		AO353_28745	0.24	+0.3
6,257,505	+		AO353_28745	0.32	+0.8
6,257,505	+		AO353_28745	0.32	-0.0
6,257,505	+		AO353_28745	0.32	-0.5
6,257,506	-		AO353_28745	0.32	-1.5
6,257,506	-		AO353_28745	0.32	-1.1
6,257,607	+		AO353_28745	0.41	+1.3
6,258,068	+		AO353_28745	0.85	+1.0