Strain Fitness in Dechlorosoma suillum PS around Dsui_2374

Experiment: ALP with Nickel (II) chloride 1.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2371 and Dsui_2372 are separated by 23 nucleotidesDsui_2372 and Dsui_2373 are separated by 34 nucleotidesDsui_2373 and Dsui_2374 are separated by 161 nucleotidesDsui_2374 and Dsui_2375 overlap by 1 nucleotides Dsui_2371: Dsui_2371 - cysteine desulfurase IscS, at 2,521,966 to 2,523,174 _2371 Dsui_2372: Dsui_2372 - FeS cluster assembly scaffold IscU, at 2,523,198 to 2,523,587 _2372 Dsui_2373: Dsui_2373 - iron-sulfur cluster assembly protein IscA, at 2,523,622 to 2,523,945 _2373 Dsui_2374: Dsui_2374 - Fe-S protein assembly co-chaperone HscB, at 2,524,107 to 2,524,637 _2374 Dsui_2375: Dsui_2375 - Fe-S protein assembly chaperone HscA, at 2,524,637 to 2,526,517 _2375 Position (kb) 2524 2525Strain fitness (log2 ratio) -1 0 1at 2523.589 kb on - strandat 2523.954 kb on + strandat 2524.068 kb on + strandat 2524.068 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 1.5 mM
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2,523,589 - +0.7
2,523,954 + -0.9
2,524,068 + -0.6
2,524,068 + -0.6

Or see this region's nucleotide sequence