Experiment: ALP with Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1763 and Dsui_1764 are separated by 34 nucleotides Dsui_1764 and Dsui_1765 overlap by 11 nucleotides Dsui_1765 and Dsui_1766 overlap by 8 nucleotides
Dsui_1763: Dsui_1763 - subfamily IIIC HAD-superfamily phosphatase, at 1,850,968 to 1,852,668
_1763
Dsui_1764: Dsui_1764 - acyl carrier protein, at 1,852,703 to 1,852,915
_1764
Dsui_1765: Dsui_1765 - acetyltransferase, ribosomal protein N-acetylase, at 1,852,905 to 1,853,489
_1765
Dsui_1766: Dsui_1766 - hypothetical protein, at 1,853,482 to 1,853,910
_1766
Position (kb)
1852
1853 Strain fitness (log2 ratio)
-2
-1
0
1 at 1851.709 kb on + strand, within Dsui_1763 at 1851.811 kb on + strand, within Dsui_1763 at 1851.852 kb on + strand, within Dsui_1763 at 1851.922 kb on - strand, within Dsui_1763 at 1852.009 kb on + strand, within Dsui_1763 at 1852.009 kb on + strand, within Dsui_1763 at 1852.017 kb on - strand, within Dsui_1763 at 1852.035 kb on - strand, within Dsui_1763 at 1852.167 kb on + strand, within Dsui_1763 at 1852.175 kb on - strand, within Dsui_1763 at 1852.272 kb on + strand, within Dsui_1763 at 1852.327 kb on - strand at 1852.377 kb on + strand, within Dsui_1763 at 1852.551 kb on - strand at 1852.646 kb on + strand at 1852.646 kb on + strand at 1852.651 kb on + strand at 1852.651 kb on + strand at 1852.654 kb on - strand at 1852.654 kb on - strand at 1852.701 kb on + strand at 1852.773 kb on - strand, within Dsui_1764 at 1852.785 kb on + strand, within Dsui_1764 at 1852.785 kb on + strand, within Dsui_1764 at 1852.785 kb on + strand, within Dsui_1764 at 1852.785 kb on + strand, within Dsui_1764 at 1852.785 kb on + strand, within Dsui_1764 at 1852.793 kb on - strand at 1852.793 kb on - strand, within Dsui_1764 at 1852.793 kb on - strand, within Dsui_1764 at 1852.826 kb on - strand, within Dsui_1764 at 1852.847 kb on - strand, within Dsui_1764 at 1852.867 kb on - strand, within Dsui_1764 at 1853.026 kb on - strand, within Dsui_1765 at 1853.069 kb on - strand, within Dsui_1765 at 1853.075 kb on - strand, within Dsui_1765 at 1853.123 kb on + strand, within Dsui_1765 at 1853.131 kb on - strand, within Dsui_1765 at 1853.248 kb on - strand, within Dsui_1765 at 1853.276 kb on + strand, within Dsui_1765 at 1853.286 kb on + strand, within Dsui_1765 at 1853.327 kb on - strand, within Dsui_1765 at 1853.332 kb on - strand, within Dsui_1765 at 1853.392 kb on + strand, within Dsui_1765 at 1853.521 kb on + strand at 1853.522 kb on - strand at 1853.544 kb on - strand, within Dsui_1766 at 1853.624 kb on + strand, within Dsui_1766 at 1853.866 kb on + strand, within Dsui_1766
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 1.5 mM remove 1,851,709 + Dsui_1763 0.44 -0.6 1,851,811 + Dsui_1763 0.50 -0.3 1,851,852 + Dsui_1763 0.52 -0.6 1,851,922 - Dsui_1763 0.56 -1.3 1,852,009 + Dsui_1763 0.61 -0.8 1,852,009 + Dsui_1763 0.61 -0.4 1,852,017 - Dsui_1763 0.62 -0.9 1,852,035 - Dsui_1763 0.63 +0.7 1,852,167 + Dsui_1763 0.70 -0.4 1,852,175 - Dsui_1763 0.71 -0.9 1,852,272 + Dsui_1763 0.77 -0.3 1,852,327 - -0.3 1,852,377 + Dsui_1763 0.83 -1.5 1,852,551 - +0.7 1,852,646 + -0.2 1,852,646 + -1.7 1,852,651 + -0.8 1,852,651 + -0.5 1,852,654 - +0.7 1,852,654 - +0.7 1,852,701 + -0.5 1,852,773 - Dsui_1764 0.33 +0.7 1,852,785 + Dsui_1764 0.38 -0.7 1,852,785 + Dsui_1764 0.38 -0.4 1,852,785 + Dsui_1764 0.38 -0.9 1,852,785 + Dsui_1764 0.38 -0.5 1,852,785 + Dsui_1764 0.38 -0.6 1,852,793 - +0.7 1,852,793 - Dsui_1764 0.42 +0.7 1,852,793 - Dsui_1764 0.42 -0.3 1,852,826 - Dsui_1764 0.58 +0.7 1,852,847 - Dsui_1764 0.68 +0.7 1,852,867 - Dsui_1764 0.77 -0.9 1,853,026 - Dsui_1765 0.21 -1.6 1,853,069 - Dsui_1765 0.28 +0.7 1,853,075 - Dsui_1765 0.29 -1.3 1,853,123 + Dsui_1765 0.37 -0.5 1,853,131 - Dsui_1765 0.39 +0.7 1,853,248 - Dsui_1765 0.59 -1.9 1,853,276 + Dsui_1765 0.63 -0.4 1,853,286 + Dsui_1765 0.65 -0.3 1,853,327 - Dsui_1765 0.72 +0.7 1,853,332 - Dsui_1765 0.73 +0.7 1,853,392 + Dsui_1765 0.83 -1.4 1,853,521 + -0.6 1,853,522 - -0.7 1,853,544 - Dsui_1766 0.14 +0.7 1,853,624 + Dsui_1766 0.33 -0.5 1,853,866 + Dsui_1766 0.90 -0.9
Or see this region's nucleotide sequence