Experiment: ALP with Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0919 and Dsui_0920 overlap by 4 nucleotides Dsui_0920 and Dsui_0921 overlap by 4 nucleotides
Dsui_0919: Dsui_0919 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 942,804 to 943,955
_0919
Dsui_0920: Dsui_0920 - fructose-2,6-bisphosphatase, at 943,952 to 944,620
_0920
Dsui_0921: Dsui_0921 - PAS domain S-box, at 944,617 to 948,909
_0921
Position (kb) 943
944
945 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 943.010 kb on + strand, within Dsui_0919 at 943.073 kb on + strand, within Dsui_0919 at 943.153 kb on - strand, within Dsui_0919 at 943.183 kb on - strand, within Dsui_0919 at 943.187 kb on + strand, within Dsui_0919 at 943.277 kb on + strand, within Dsui_0919 at 943.284 kb on - strand, within Dsui_0919 at 943.285 kb on - strand, within Dsui_0919 at 943.361 kb on + strand, within Dsui_0919 at 943.369 kb on - strand, within Dsui_0919 at 943.396 kb on - strand, within Dsui_0919 at 943.478 kb on + strand, within Dsui_0919 at 943.595 kb on + strand, within Dsui_0919 at 943.644 kb on + strand, within Dsui_0919 at 944.206 kb on + strand, within Dsui_0920 at 944.341 kb on + strand, within Dsui_0920 at 944.595 kb on + strand at 944.595 kb on + strand at 944.595 kb on + strand at 944.595 kb on + strand at 944.603 kb on - strand at 944.635 kb on + strand at 944.830 kb on - strand at 944.846 kb on - strand at 945.012 kb on + strand at 945.122 kb on + strand, within Dsui_0921 at 945.221 kb on + strand, within Dsui_0921 at 945.269 kb on + strand, within Dsui_0921 at 945.344 kb on + strand, within Dsui_0921 at 945.393 kb on + strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.441 kb on + strand, within Dsui_0921 at 945.480 kb on + strand, within Dsui_0921 at 945.505 kb on - strand, within Dsui_0921
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 1.5 mM remove 943,010 + Dsui_0919 0.18 +0.2 943,073 + Dsui_0919 0.23 -1.1 943,153 - Dsui_0919 0.30 -0.9 943,183 - Dsui_0919 0.33 -0.4 943,187 + Dsui_0919 0.33 -1.9 943,277 + Dsui_0919 0.41 +0.6 943,284 - Dsui_0919 0.42 -0.4 943,285 - Dsui_0919 0.42 -0.9 943,361 + Dsui_0919 0.48 +0.6 943,369 - Dsui_0919 0.49 +0.6 943,396 - Dsui_0919 0.51 +0.6 943,478 + Dsui_0919 0.59 -1.2 943,595 + Dsui_0919 0.69 -1.7 943,644 + Dsui_0919 0.73 -1.4 944,206 + Dsui_0920 0.38 -0.9 944,341 + Dsui_0920 0.58 +0.6 944,595 + -2.2 944,595 + +0.6 944,595 + +0.6 944,595 + -0.4 944,603 - -1.4 944,635 + -0.4 944,830 - +0.6 944,846 - -0.4 945,012 + -0.9 945,122 + Dsui_0921 0.12 -1.8 945,221 + Dsui_0921 0.14 -1.4 945,269 + Dsui_0921 0.15 -1.7 945,344 + Dsui_0921 0.17 -2.2 945,393 + Dsui_0921 0.18 -2.9 945,401 - Dsui_0921 0.18 -2.2 945,401 - Dsui_0921 0.18 +0.6 945,401 - Dsui_0921 0.18 +0.6 945,441 + Dsui_0921 0.19 -1.5 945,480 + Dsui_0921 0.20 +0.6 945,505 - Dsui_0921 0.21 -0.4
Or see this region's nucleotide sequence