Strain Fitness in Dechlorosoma suillum PS around Dsui_0645

Experiment: ALP with Nickel (II) chloride 1.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0644 and Dsui_0645 are separated by 168 nucleotidesDsui_0645 and Dsui_0646 are separated by 215 nucleotides Dsui_0644: Dsui_0644 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 637,241 to 638,917 _0644 Dsui_0645: Dsui_0645 - S-adenosylmethionine synthetase, at 639,086 to 640,249 _0645 Dsui_0646: Dsui_0646 - Lauroyl/myristoyl acyltransferase, at 640,465 to 641,355 _0646 Position (kb) 639 640 641Strain fitness (log2 ratio) -3 -2 -1 0 1at 638.128 kb on + strand, within Dsui_0644at 638.133 kb on + strand, within Dsui_0644at 638.135 kb on - strand, within Dsui_0644at 638.151 kb on - strand, within Dsui_0644at 638.184 kb on - strand, within Dsui_0644at 638.205 kb on - strand, within Dsui_0644at 638.219 kb on - strand, within Dsui_0644at 638.240 kb on + strand, within Dsui_0644at 638.264 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.329 kb on + strand, within Dsui_0644at 638.346 kb on + strand, within Dsui_0644at 638.390 kb on + strand, within Dsui_0644at 638.427 kb on - strand, within Dsui_0644at 638.427 kb on - strand, within Dsui_0644at 638.450 kb on + strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.586 kb on - strand, within Dsui_0644at 638.600 kb on - strand, within Dsui_0644at 638.712 kb on - strand, within Dsui_0644at 638.770 kb on + strandat 638.785 kb on + strandat 638.880 kb on - strandat 638.913 kb on + strandat 638.913 kb on + strandat 638.922 kb on - strandat 638.964 kb on + strandat 638.983 kb on + strandat 639.055 kb on + strandat 639.065 kb on - strandat 639.110 kb on - strandat 640.265 kb on - strandat 640.304 kb on + strandat 640.304 kb on + strandat 640.306 kb on - strandat 640.307 kb on - strandat 640.307 kb on - strandat 640.354 kb on + strandat 640.359 kb on + strandat 640.362 kb on - strandat 640.362 kb on - strandat 640.402 kb on + strandat 640.402 kb on + strandat 640.402 kb on + strandat 640.402 kb on + strandat 640.402 kb on + strandat 640.462 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 1.5 mM
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638,128 + Dsui_0644 0.53 +0.6
638,133 + Dsui_0644 0.53 -2.2
638,135 - Dsui_0644 0.53 -0.4
638,151 - Dsui_0644 0.54 -0.4
638,184 - Dsui_0644 0.56 +0.6
638,205 - Dsui_0644 0.57 -0.4
638,219 - Dsui_0644 0.58 -0.4
638,240 + Dsui_0644 0.60 -1.4
638,264 - Dsui_0644 0.61 +0.6
638,327 - Dsui_0644 0.65 +0.6
638,327 - Dsui_0644 0.65 -0.4
638,327 - Dsui_0644 0.65 -1.7
638,327 - Dsui_0644 0.65 +0.6
638,327 - Dsui_0644 0.65 +0.6
638,329 + Dsui_0644 0.65 +0.6
638,346 + Dsui_0644 0.66 +0.6
638,390 + Dsui_0644 0.69 -0.4
638,427 - Dsui_0644 0.71 +0.6
638,427 - Dsui_0644 0.71 +0.6
638,450 + Dsui_0644 0.72 -2.2
638,531 - Dsui_0644 0.77 -1.4
638,531 - Dsui_0644 0.77 -1.0
638,531 - Dsui_0644 0.77 -1.0
638,586 - Dsui_0644 0.80 -0.4
638,600 - Dsui_0644 0.81 +0.6
638,712 - Dsui_0644 0.88 -0.4
638,770 + -0.4
638,785 + -1.0
638,880 - -1.0
638,913 + -1.4
638,913 + +0.6
638,922 - -0.4
638,964 + -1.4
638,983 + -2.2
639,055 + +1.6
639,065 - -0.7
639,110 - -2.4
640,265 - -2.1
640,304 + +0.6
640,304 + -1.4
640,306 - -1.2
640,307 - -1.4
640,307 - -0.9
640,354 + -0.4
640,359 + -1.0
640,362 - -2.5
640,362 - -2.7
640,402 + -2.0
640,402 + -1.0
640,402 + -3.2
640,402 + -1.4
640,402 + +0.6
640,462 + -0.9

Or see this region's nucleotide sequence