Experiment: ALP with Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0632 and Dsui_0633 are separated by 54 nucleotides Dsui_0633 and Dsui_0634 are separated by 105 nucleotides
Dsui_0632: Dsui_0632 - thioredoxin domain-containing protein, at 625,361 to 627,409
_0632
Dsui_0633: Dsui_0633 - transcriptional regulator, at 627,464 to 628,369
_0633
Dsui_0634: Dsui_0634 - putative permease, DMT superfamily, at 628,475 to 629,386
_0634
Position (kb) 627
628
629 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 626.554 kb on + strand, within Dsui_0632 at 626.568 kb on + strand, within Dsui_0632 at 626.643 kb on - strand, within Dsui_0632 at 626.837 kb on + strand, within Dsui_0632 at 626.857 kb on + strand, within Dsui_0632 at 626.879 kb on - strand, within Dsui_0632 at 626.889 kb on - strand, within Dsui_0632 at 626.934 kb on + strand, within Dsui_0632 at 626.934 kb on + strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.942 kb on - strand, within Dsui_0632 at 626.990 kb on + strand, within Dsui_0632 at 627.143 kb on - strand, within Dsui_0632 at 627.175 kb on + strand, within Dsui_0632 at 627.241 kb on - strand at 627.261 kb on - strand at 627.381 kb on - strand at 627.462 kb on + strand at 627.497 kb on - strand at 627.627 kb on - strand, within Dsui_0633 at 627.673 kb on - strand, within Dsui_0633 at 627.741 kb on - strand, within Dsui_0633 at 627.883 kb on - strand, within Dsui_0633 at 627.943 kb on - strand, within Dsui_0633 at 627.988 kb on + strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.996 kb on - strand, within Dsui_0633 at 627.999 kb on + strand, within Dsui_0633 at 628.004 kb on + strand, within Dsui_0633 at 628.012 kb on - strand, within Dsui_0633 at 628.012 kb on - strand, within Dsui_0633 at 628.075 kb on - strand, within Dsui_0633 at 628.135 kb on + strand, within Dsui_0633 at 628.215 kb on + strand, within Dsui_0633 at 628.340 kb on - strand at 628.578 kb on - strand, within Dsui_0634 at 628.642 kb on + strand, within Dsui_0634 at 628.685 kb on - strand, within Dsui_0634 at 628.701 kb on + strand, within Dsui_0634 at 628.701 kb on + strand, within Dsui_0634 at 628.776 kb on - strand, within Dsui_0634 at 628.796 kb on + strand, within Dsui_0634 at 628.806 kb on + strand, within Dsui_0634 at 628.819 kb on - strand, within Dsui_0634 at 628.845 kb on - strand, within Dsui_0634 at 628.982 kb on + strand, within Dsui_0634 at 628.987 kb on + strand, within Dsui_0634 at 628.990 kb on - strand, within Dsui_0634 at 628.990 kb on - strand, within Dsui_0634 at 629.188 kb on - strand, within Dsui_0634 at 629.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 1.5 mM remove 626,554 + Dsui_0632 0.58 -0.4 626,568 + Dsui_0632 0.59 -1.0 626,643 - Dsui_0632 0.63 -1.1 626,837 + Dsui_0632 0.72 -1.7 626,857 + Dsui_0632 0.73 -2.9 626,879 - Dsui_0632 0.74 -1.2 626,889 - Dsui_0632 0.75 -0.6 626,934 + Dsui_0632 0.77 +0.6 626,934 + Dsui_0632 0.77 -1.4 626,942 - Dsui_0632 0.77 -1.3 626,942 - Dsui_0632 0.77 -2.0 626,942 - Dsui_0632 0.77 -1.3 626,942 - Dsui_0632 0.77 -1.3 626,990 + Dsui_0632 0.80 -2.2 627,143 - Dsui_0632 0.87 -0.9 627,175 + Dsui_0632 0.89 +0.6 627,241 - -1.1 627,261 - -1.0 627,381 - -0.6 627,462 + -0.4 627,497 - -1.4 627,627 - Dsui_0633 0.18 -1.2 627,673 - Dsui_0633 0.23 +0.8 627,741 - Dsui_0633 0.31 -1.0 627,883 - Dsui_0633 0.46 -0.8 627,943 - Dsui_0633 0.53 -1.0 627,988 + Dsui_0633 0.58 -0.4 627,996 - Dsui_0633 0.59 -0.9 627,996 - Dsui_0633 0.59 -0.6 627,996 - Dsui_0633 0.59 -1.3 627,999 + Dsui_0633 0.59 +0.6 628,004 + Dsui_0633 0.60 +0.6 628,012 - Dsui_0633 0.60 -1.5 628,012 - Dsui_0633 0.60 -1.4 628,075 - Dsui_0633 0.67 -1.0 628,135 + Dsui_0633 0.74 -0.4 628,215 + Dsui_0633 0.83 -1.0 628,340 - -1.3 628,578 - Dsui_0634 0.11 +0.6 628,642 + Dsui_0634 0.18 -0.8 628,685 - Dsui_0634 0.23 -1.4 628,701 + Dsui_0634 0.25 -0.8 628,701 + Dsui_0634 0.25 +0.6 628,776 - Dsui_0634 0.33 -2.2 628,796 + Dsui_0634 0.35 -2.0 628,806 + Dsui_0634 0.36 -1.9 628,819 - Dsui_0634 0.38 -0.4 628,845 - Dsui_0634 0.41 +0.6 628,982 + Dsui_0634 0.56 +0.6 628,987 + Dsui_0634 0.56 -1.9 628,990 - Dsui_0634 0.56 -1.7 628,990 - Dsui_0634 0.56 +0.6 629,188 - Dsui_0634 0.78 -1.7 629,359 - +0.6
Or see this region's nucleotide sequence