Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27740 and BWI76_RS27745 are separated by 294 nucleotides BWI76_RS27745 and BWI76_RS27750 are separated by 11 nucleotides BWI76_RS27750 and BWI76_RS27755 are separated by 107 nucleotides BWI76_RS27755 and BWI76_RS27760 are separated by 102 nucleotides
BWI76_RS27740: BWI76_RS27740 - LacI family transcriptional regulator, at 5,756,457 to 5,757,398
_RS27740
BWI76_RS27745: BWI76_RS27745 - PTS sugar transporter subunit IIB, at 5,757,693 to 5,758,004
_RS27745
BWI76_RS27750: BWI76_RS27750 - PTS lactose/cellobiose family transporter subunit IIC, at 5,758,016 to 5,759,341
_RS27750
BWI76_RS27755: BWI76_RS27755 - molecular chaperone TorD, at 5,759,449 to 5,759,751
_RS27755
BWI76_RS27760: BWI76_RS27760 - lactam utilization protein LamB, at 5,759,854 to 5,761,233
_RS27760
Position (kb) 5758
5759
5760 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5757.066 kb on + strand, within BWI76_RS27740 at 5757.092 kb on - strand, within BWI76_RS27740 at 5757.105 kb on - strand, within BWI76_RS27740 at 5757.187 kb on + strand, within BWI76_RS27740 at 5757.338 kb on - strand at 5757.437 kb on - strand at 5757.598 kb on + strand at 5757.604 kb on - strand at 5757.700 kb on + strand at 5757.713 kb on - strand at 5757.776 kb on - strand, within BWI76_RS27745 at 5757.799 kb on - strand, within BWI76_RS27745 at 5757.903 kb on + strand, within BWI76_RS27745 at 5757.931 kb on + strand, within BWI76_RS27745 at 5757.938 kb on + strand, within BWI76_RS27745 at 5757.999 kb on + strand at 5758.015 kb on + strand at 5758.035 kb on - strand at 5758.067 kb on - strand at 5758.080 kb on + strand at 5758.238 kb on - strand, within BWI76_RS27750 at 5758.252 kb on + strand, within BWI76_RS27750 at 5758.310 kb on - strand, within BWI76_RS27750 at 5758.344 kb on + strand, within BWI76_RS27750 at 5758.353 kb on + strand, within BWI76_RS27750 at 5758.389 kb on + strand, within BWI76_RS27750 at 5758.434 kb on - strand, within BWI76_RS27750 at 5758.491 kb on - strand, within BWI76_RS27750 at 5758.553 kb on - strand, within BWI76_RS27750 at 5758.623 kb on - strand, within BWI76_RS27750 at 5758.630 kb on + strand, within BWI76_RS27750 at 5758.666 kb on + strand, within BWI76_RS27750 at 5758.707 kb on - strand, within BWI76_RS27750 at 5758.797 kb on - strand, within BWI76_RS27750 at 5758.854 kb on - strand, within BWI76_RS27750 at 5759.017 kb on - strand, within BWI76_RS27750 at 5759.017 kb on - strand, within BWI76_RS27750 at 5759.054 kb on - strand, within BWI76_RS27750 at 5759.069 kb on - strand, within BWI76_RS27750 at 5759.069 kb on - strand, within BWI76_RS27750 at 5759.074 kb on + strand, within BWI76_RS27750 at 5759.082 kb on - strand, within BWI76_RS27750 at 5759.089 kb on + strand at 5759.097 kb on - strand, within BWI76_RS27750 at 5759.097 kb on - strand, within BWI76_RS27750 at 5759.121 kb on + strand, within BWI76_RS27750 at 5759.129 kb on - strand, within BWI76_RS27750 at 5759.153 kb on - strand, within BWI76_RS27750 at 5759.209 kb on - strand at 5759.234 kb on + strand at 5759.234 kb on + strand at 5759.234 kb on + strand at 5759.239 kb on + strand at 5759.242 kb on - strand at 5759.242 kb on - strand at 5759.242 kb on - strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on + strand at 5759.262 kb on - strand at 5759.267 kb on + strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.270 kb on - strand at 5759.312 kb on + strand at 5759.318 kb on - strand at 5759.320 kb on - strand at 5759.320 kb on - strand at 5759.330 kb on - strand at 5759.342 kb on - strand at 5759.342 kb on - strand at 5759.435 kb on + strand at 5759.435 kb on + strand at 5759.443 kb on - strand at 5759.443 kb on - strand at 5759.489 kb on + strand, within BWI76_RS27755 at 5759.494 kb on + strand, within BWI76_RS27755 at 5759.503 kb on + strand, within BWI76_RS27755 at 5759.513 kb on + strand, within BWI76_RS27755 at 5759.513 kb on + strand, within BWI76_RS27755 at 5759.513 kb on + strand, within BWI76_RS27755 at 5759.513 kb on - strand, within BWI76_RS27755 at 5759.521 kb on - strand, within BWI76_RS27755 at 5759.521 kb on - strand, within BWI76_RS27755 at 5759.521 kb on - strand, within BWI76_RS27755 at 5759.526 kb on + strand, within BWI76_RS27755 at 5759.526 kb on + strand, within BWI76_RS27755 at 5759.526 kb on + strand, within BWI76_RS27755 at 5759.526 kb on + strand, within BWI76_RS27755 at 5759.526 kb on + strand, within BWI76_RS27755 at 5759.531 kb on - strand, within BWI76_RS27755 at 5759.534 kb on - strand, within BWI76_RS27755 at 5759.534 kb on - strand, within BWI76_RS27755 at 5759.534 kb on - strand, within BWI76_RS27755 at 5759.534 kb on - strand, within BWI76_RS27755 at 5759.541 kb on + strand, within BWI76_RS27755 at 5759.549 kb on - strand, within BWI76_RS27755 at 5759.561 kb on + strand, within BWI76_RS27755 at 5759.584 kb on + strand, within BWI76_RS27755 at 5759.584 kb on + strand, within BWI76_RS27755 at 5759.585 kb on - strand, within BWI76_RS27755 at 5759.586 kb on - strand, within BWI76_RS27755 at 5759.592 kb on - strand, within BWI76_RS27755 at 5759.592 kb on - strand at 5759.592 kb on - strand, within BWI76_RS27755 at 5759.592 kb on - strand, within BWI76_RS27755 at 5759.592 kb on - strand, within BWI76_RS27755 at 5759.602 kb on + strand, within BWI76_RS27755 at 5759.602 kb on + strand, within BWI76_RS27755 at 5759.602 kb on + strand, within BWI76_RS27755 at 5759.602 kb on + strand, within BWI76_RS27755 at 5759.610 kb on - strand, within BWI76_RS27755 at 5759.610 kb on - strand, within BWI76_RS27755 at 5759.613 kb on + strand, within BWI76_RS27755 at 5759.621 kb on - strand, within BWI76_RS27755 at 5759.621 kb on - strand, within BWI76_RS27755 at 5759.660 kb on - strand, within BWI76_RS27755 at 5759.668 kb on - strand, within BWI76_RS27755 at 5759.685 kb on - strand, within BWI76_RS27755 at 5759.685 kb on - strand, within BWI76_RS27755 at 5759.690 kb on - strand, within BWI76_RS27755 at 5759.690 kb on - strand, within BWI76_RS27755 at 5759.704 kb on - strand, within BWI76_RS27755 at 5759.761 kb on + strand at 5759.785 kb on + strand at 5759.794 kb on + strand at 5759.794 kb on + strand at 5759.794 kb on + strand at 5759.794 kb on + strand at 5759.794 kb on + strand at 5759.802 kb on - strand at 5759.874 kb on + strand at 5759.882 kb on - strand at 5759.894 kb on + strand at 5759.894 kb on + strand at 5759.894 kb on + strand at 5759.894 kb on + strand at 5759.894 kb on + strand at 5759.896 kb on + strand at 5759.904 kb on + strand at 5759.904 kb on + strand at 5759.930 kb on + strand at 5759.938 kb on - strand at 5759.955 kb on - strand at 5759.962 kb on - strand at 5759.969 kb on - strand at 5759.970 kb on - strand at 5759.976 kb on - strand at 5759.983 kb on - strand at 5759.983 kb on - strand at 5760.270 kb on - strand, within BWI76_RS27760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 5,757,066 + BWI76_RS27740 0.65 +0.8 5,757,092 - BWI76_RS27740 0.67 +0.3 5,757,105 - BWI76_RS27740 0.69 +0.1 5,757,187 + BWI76_RS27740 0.77 +1.1 5,757,338 - +0.3 5,757,437 - -0.0 5,757,598 + +0.8 5,757,604 - -1.6 5,757,700 + -1.3 5,757,713 - -0.5 5,757,776 - BWI76_RS27745 0.27 -0.7 5,757,799 - BWI76_RS27745 0.34 -1.7 5,757,903 + BWI76_RS27745 0.67 +0.5 5,757,931 + BWI76_RS27745 0.76 +0.5 5,757,938 + BWI76_RS27745 0.79 -0.3 5,757,999 + +0.5 5,758,015 + -1.9 5,758,035 - -0.3 5,758,067 - +1.8 5,758,080 + -2.1 5,758,238 - BWI76_RS27750 0.17 -0.5 5,758,252 + BWI76_RS27750 0.18 -1.4 5,758,310 - BWI76_RS27750 0.22 -1.3 5,758,344 + BWI76_RS27750 0.25 -1.0 5,758,353 + BWI76_RS27750 0.25 -1.4 5,758,389 + BWI76_RS27750 0.28 -0.1 5,758,434 - BWI76_RS27750 0.32 -1.6 5,758,491 - BWI76_RS27750 0.36 -0.8 5,758,553 - BWI76_RS27750 0.40 -0.9 5,758,623 - BWI76_RS27750 0.46 -0.5 5,758,630 + BWI76_RS27750 0.46 -0.2 5,758,666 + BWI76_RS27750 0.49 -2.0 5,758,707 - BWI76_RS27750 0.52 -0.7 5,758,797 - BWI76_RS27750 0.59 -1.3 5,758,854 - BWI76_RS27750 0.63 -0.2 5,759,017 - BWI76_RS27750 0.75 -1.0 5,759,017 - BWI76_RS27750 0.75 -1.3 5,759,054 - BWI76_RS27750 0.78 -2.6 5,759,069 - BWI76_RS27750 0.79 -1.2 5,759,069 - BWI76_RS27750 0.79 +2.8 5,759,074 + BWI76_RS27750 0.80 -1.9 5,759,082 - BWI76_RS27750 0.80 -0.4 5,759,089 + -0.2 5,759,097 - BWI76_RS27750 0.82 -0.8 5,759,097 - BWI76_RS27750 0.82 -1.2 5,759,121 + BWI76_RS27750 0.83 -0.2 5,759,129 - BWI76_RS27750 0.84 -2.0 5,759,153 - BWI76_RS27750 0.86 -0.8 5,759,209 - -0.8 5,759,234 + -0.4 5,759,234 + +1.8 5,759,234 + -2.2 5,759,239 + -0.5 5,759,242 - -1.3 5,759,242 - -1.4 5,759,242 - -0.1 5,759,262 + +1.8 5,759,262 + -0.7 5,759,262 + -0.8 5,759,262 + -0.4 5,759,262 + -1.4 5,759,262 + -1.0 5,759,262 + -0.6 5,759,262 + -1.0 5,759,262 + -1.0 5,759,262 + -0.0 5,759,262 + -0.5 5,759,262 - +0.5 5,759,267 + +1.8 5,759,270 - -0.6 5,759,270 - +0.4 5,759,270 - -0.8 5,759,270 - -0.5 5,759,270 - -1.2 5,759,270 - -1.2 5,759,270 - +0.1 5,759,312 + -1.2 5,759,318 - +0.0 5,759,320 - -1.6 5,759,320 - -0.7 5,759,330 - +0.2 5,759,342 - +0.2 5,759,342 - -1.3 5,759,435 + -0.3 5,759,435 + +0.6 5,759,443 - +1.8 5,759,443 - -0.6 5,759,489 + BWI76_RS27755 0.13 -0.4 5,759,494 + BWI76_RS27755 0.15 -0.4 5,759,503 + BWI76_RS27755 0.18 +0.0 5,759,513 + BWI76_RS27755 0.21 -2.4 5,759,513 + BWI76_RS27755 0.21 -0.4 5,759,513 + BWI76_RS27755 0.21 +0.4 5,759,513 - BWI76_RS27755 0.21 -0.7 5,759,521 - BWI76_RS27755 0.24 -1.3 5,759,521 - BWI76_RS27755 0.24 +0.8 5,759,521 - BWI76_RS27755 0.24 -0.2 5,759,526 + BWI76_RS27755 0.25 -1.1 5,759,526 + BWI76_RS27755 0.25 -0.4 5,759,526 + BWI76_RS27755 0.25 +0.8 5,759,526 + BWI76_RS27755 0.25 -0.4 5,759,526 + BWI76_RS27755 0.25 +0.3 5,759,531 - BWI76_RS27755 0.27 -1.4 5,759,534 - BWI76_RS27755 0.28 +1.3 5,759,534 - BWI76_RS27755 0.28 -1.9 5,759,534 - BWI76_RS27755 0.28 +0.3 5,759,534 - BWI76_RS27755 0.28 +0.2 5,759,541 + BWI76_RS27755 0.30 -0.4 5,759,549 - BWI76_RS27755 0.33 +0.2 5,759,561 + BWI76_RS27755 0.37 -0.1 5,759,584 + BWI76_RS27755 0.45 +0.2 5,759,584 + BWI76_RS27755 0.45 +0.8 5,759,585 - BWI76_RS27755 0.45 -0.5 5,759,586 - BWI76_RS27755 0.45 -0.5 5,759,592 - BWI76_RS27755 0.47 -0.9 5,759,592 - +0.2 5,759,592 - BWI76_RS27755 0.47 +1.8 5,759,592 - BWI76_RS27755 0.47 -0.4 5,759,592 - BWI76_RS27755 0.47 -0.4 5,759,602 + BWI76_RS27755 0.50 +0.3 5,759,602 + BWI76_RS27755 0.50 -0.5 5,759,602 + BWI76_RS27755 0.50 -0.1 5,759,602 + BWI76_RS27755 0.50 -0.5 5,759,610 - BWI76_RS27755 0.53 -0.2 5,759,610 - BWI76_RS27755 0.53 -1.4 5,759,613 + BWI76_RS27755 0.54 -0.1 5,759,621 - BWI76_RS27755 0.57 +0.1 5,759,621 - BWI76_RS27755 0.57 +0.8 5,759,660 - BWI76_RS27755 0.70 -0.5 5,759,668 - BWI76_RS27755 0.72 -0.3 5,759,685 - BWI76_RS27755 0.78 +0.7 5,759,685 - BWI76_RS27755 0.78 -0.6 5,759,690 - BWI76_RS27755 0.80 -0.3 5,759,690 - BWI76_RS27755 0.80 -0.8 5,759,704 - BWI76_RS27755 0.84 +0.7 5,759,761 + -1.3 5,759,785 + -0.9 5,759,794 + -0.2 5,759,794 + -0.4 5,759,794 + -0.4 5,759,794 + -0.9 5,759,794 + -0.1 5,759,802 - +1.8 5,759,874 + -0.1 5,759,882 - +0.6 5,759,894 + -0.2 5,759,894 + -0.5 5,759,894 + -0.9 5,759,894 + +0.2 5,759,894 + +0.4 5,759,896 + -0.6 5,759,904 + +0.4 5,759,904 + +0.0 5,759,930 + +1.2 5,759,938 - -0.5 5,759,955 - -0.1 5,759,962 - +0.4 5,759,969 - -0.4 5,759,970 - -0.1 5,759,976 - +1.0 5,759,983 - -0.2 5,759,983 - -0.7 5,760,270 - BWI76_RS27760 0.30 +0.5
Or see this region's nucleotide sequence