Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19705 and BWI76_RS19710 are separated by 32 nucleotides BWI76_RS19710 and BWI76_RS19715 are separated by 95 nucleotides
BWI76_RS19705: BWI76_RS19705 - kinase, at 4,118,306 to 4,119,394
_RS19705
BWI76_RS19710: BWI76_RS19710 - NupC/NupG family nucleoside CNT transporter, at 4,119,427 to 4,120,677
_RS19710
BWI76_RS19715: BWI76_RS19715 - pseudouridine-5'-phosphate glycosidase, at 4,120,773 to 4,121,708
_RS19715
Position (kb)
4119
4120
4121 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4118.511 kb on - strand, within BWI76_RS19705 at 4118.776 kb on + strand, within BWI76_RS19705 at 4118.876 kb on + strand, within BWI76_RS19705 at 4118.918 kb on + strand, within BWI76_RS19705 at 4119.258 kb on - strand, within BWI76_RS19705 at 4119.258 kb on - strand, within BWI76_RS19705 at 4119.470 kb on + strand at 4119.474 kb on - strand at 4119.744 kb on - strand, within BWI76_RS19710 at 4119.813 kb on + strand, within BWI76_RS19710 at 4120.020 kb on + strand, within BWI76_RS19710 at 4120.572 kb on + strand at 4120.646 kb on + strand at 4120.659 kb on - strand at 4120.712 kb on + strand at 4120.777 kb on - strand at 4120.832 kb on - strand at 4121.025 kb on + strand, within BWI76_RS19715 at 4121.068 kb on + strand, within BWI76_RS19715 at 4121.069 kb on - strand, within BWI76_RS19715 at 4121.074 kb on + strand, within BWI76_RS19715 at 4121.079 kb on + strand, within BWI76_RS19715 at 4121.084 kb on + strand, within BWI76_RS19715 at 4121.085 kb on - strand, within BWI76_RS19715 at 4121.087 kb on - strand, within BWI76_RS19715 at 4121.096 kb on + strand, within BWI76_RS19715 at 4121.116 kb on - strand, within BWI76_RS19715 at 4121.132 kb on + strand, within BWI76_RS19715 at 4121.140 kb on - strand, within BWI76_RS19715 at 4121.162 kb on + strand, within BWI76_RS19715 at 4121.163 kb on + strand, within BWI76_RS19715 at 4121.170 kb on - strand, within BWI76_RS19715 at 4121.221 kb on + strand, within BWI76_RS19715 at 4121.229 kb on - strand, within BWI76_RS19715 at 4121.229 kb on - strand, within BWI76_RS19715 at 4121.229 kb on - strand, within BWI76_RS19715 at 4121.229 kb on - strand, within BWI76_RS19715 at 4121.229 kb on - strand, within BWI76_RS19715 at 4121.231 kb on + strand, within BWI76_RS19715 at 4121.239 kb on - strand, within BWI76_RS19715 at 4121.239 kb on - strand, within BWI76_RS19715 at 4121.239 kb on - strand, within BWI76_RS19715 at 4121.255 kb on + strand, within BWI76_RS19715 at 4121.298 kb on - strand, within BWI76_RS19715 at 4121.298 kb on - strand, within BWI76_RS19715 at 4121.298 kb on - strand, within BWI76_RS19715 at 4121.300 kb on - strand, within BWI76_RS19715 at 4121.305 kb on - strand, within BWI76_RS19715 at 4121.308 kb on - strand, within BWI76_RS19715 at 4121.338 kb on - strand, within BWI76_RS19715 at 4121.367 kb on + strand, within BWI76_RS19715 at 4121.374 kb on - strand, within BWI76_RS19715 at 4121.374 kb on - strand, within BWI76_RS19715 at 4121.375 kb on - strand, within BWI76_RS19715 at 4121.375 kb on - strand, within BWI76_RS19715 at 4121.385 kb on + strand, within BWI76_RS19715 at 4121.385 kb on + strand, within BWI76_RS19715 at 4121.437 kb on + strand, within BWI76_RS19715 at 4121.437 kb on - strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.439 kb on + strand, within BWI76_RS19715 at 4121.445 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.447 kb on - strand, within BWI76_RS19715 at 4121.452 kb on - strand, within BWI76_RS19715 at 4121.462 kb on + strand, within BWI76_RS19715 at 4121.462 kb on - strand, within BWI76_RS19715 at 4121.470 kb on - strand, within BWI76_RS19715 at 4121.486 kb on - strand, within BWI76_RS19715 at 4121.486 kb on - strand, within BWI76_RS19715 at 4121.486 kb on - strand, within BWI76_RS19715 at 4121.533 kb on + strand, within BWI76_RS19715 at 4121.557 kb on + strand, within BWI76_RS19715 at 4121.589 kb on + strand, within BWI76_RS19715 at 4121.590 kb on + strand, within BWI76_RS19715 at 4121.611 kb on - strand, within BWI76_RS19715
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 4,118,511 - BWI76_RS19705 0.19 -1.0 4,118,776 + BWI76_RS19705 0.43 +0.7 4,118,876 + BWI76_RS19705 0.52 -0.3 4,118,918 + BWI76_RS19705 0.56 +0.9 4,119,258 - BWI76_RS19705 0.87 +0.0 4,119,258 - BWI76_RS19705 0.87 -2.2 4,119,470 + +0.2 4,119,474 - +2.6 4,119,744 - BWI76_RS19710 0.25 -1.2 4,119,813 + BWI76_RS19710 0.31 -0.5 4,120,020 + BWI76_RS19710 0.47 -2.3 4,120,572 + +0.4 4,120,646 + -0.5 4,120,659 - +0.7 4,120,712 + +0.2 4,120,777 - +1.4 4,120,832 - +0.7 4,121,025 + BWI76_RS19715 0.27 -1.2 4,121,068 + BWI76_RS19715 0.32 +0.0 4,121,069 - BWI76_RS19715 0.32 -0.4 4,121,074 + BWI76_RS19715 0.32 -0.4 4,121,079 + BWI76_RS19715 0.33 +0.2 4,121,084 + BWI76_RS19715 0.33 -0.2 4,121,085 - BWI76_RS19715 0.33 -1.0 4,121,087 - BWI76_RS19715 0.34 -0.3 4,121,096 + BWI76_RS19715 0.35 +0.4 4,121,116 - BWI76_RS19715 0.37 +0.2 4,121,132 + BWI76_RS19715 0.38 +0.1 4,121,140 - BWI76_RS19715 0.39 +0.6 4,121,162 + BWI76_RS19715 0.42 +0.3 4,121,163 + BWI76_RS19715 0.42 -0.2 4,121,170 - BWI76_RS19715 0.42 -0.8 4,121,221 + BWI76_RS19715 0.48 -0.2 4,121,229 - BWI76_RS19715 0.49 -0.7 4,121,229 - BWI76_RS19715 0.49 +1.1 4,121,229 - BWI76_RS19715 0.49 -0.8 4,121,229 - BWI76_RS19715 0.49 +1.6 4,121,229 - BWI76_RS19715 0.49 +0.6 4,121,231 + BWI76_RS19715 0.49 -0.2 4,121,239 - BWI76_RS19715 0.50 +0.7 4,121,239 - BWI76_RS19715 0.50 +0.1 4,121,239 - BWI76_RS19715 0.50 +0.7 4,121,255 + BWI76_RS19715 0.51 +1.1 4,121,298 - BWI76_RS19715 0.56 +1.4 4,121,298 - BWI76_RS19715 0.56 +0.1 4,121,298 - BWI76_RS19715 0.56 -0.1 4,121,300 - BWI76_RS19715 0.56 +0.1 4,121,305 - BWI76_RS19715 0.57 -1.4 4,121,308 - BWI76_RS19715 0.57 +0.1 4,121,338 - BWI76_RS19715 0.60 -0.4 4,121,367 + BWI76_RS19715 0.63 -1.4 4,121,374 - BWI76_RS19715 0.64 -0.8 4,121,374 - BWI76_RS19715 0.64 -0.3 4,121,375 - BWI76_RS19715 0.64 -0.6 4,121,375 - BWI76_RS19715 0.64 +0.8 4,121,385 + BWI76_RS19715 0.65 -1.2 4,121,385 + BWI76_RS19715 0.65 -0.4 4,121,437 + BWI76_RS19715 0.71 -0.2 4,121,437 - BWI76_RS19715 0.71 -0.2 4,121,439 + BWI76_RS19715 0.71 +0.6 4,121,439 + BWI76_RS19715 0.71 +1.6 4,121,439 + BWI76_RS19715 0.71 -0.8 4,121,439 + BWI76_RS19715 0.71 -1.1 4,121,439 + BWI76_RS19715 0.71 -0.0 4,121,439 + BWI76_RS19715 0.71 +0.2 4,121,445 - BWI76_RS19715 0.72 -0.8 4,121,447 - BWI76_RS19715 0.72 +0.5 4,121,447 - BWI76_RS19715 0.72 +0.1 4,121,447 - BWI76_RS19715 0.72 +1.8 4,121,447 - BWI76_RS19715 0.72 +0.5 4,121,447 - BWI76_RS19715 0.72 -0.7 4,121,447 - BWI76_RS19715 0.72 +0.7 4,121,447 - BWI76_RS19715 0.72 -0.6 4,121,447 - BWI76_RS19715 0.72 +0.4 4,121,447 - BWI76_RS19715 0.72 -0.7 4,121,452 - BWI76_RS19715 0.73 -1.5 4,121,462 + BWI76_RS19715 0.74 -0.9 4,121,462 - BWI76_RS19715 0.74 -0.8 4,121,470 - BWI76_RS19715 0.74 -0.8 4,121,486 - BWI76_RS19715 0.76 -0.2 4,121,486 - BWI76_RS19715 0.76 +0.4 4,121,486 - BWI76_RS19715 0.76 +1.4 4,121,533 + BWI76_RS19715 0.81 -1.2 4,121,557 + BWI76_RS19715 0.84 +0.7 4,121,589 + BWI76_RS19715 0.87 -0.1 4,121,590 + BWI76_RS19715 0.87 +0.3 4,121,611 - BWI76_RS19715 0.90 +0.6
Or see this region's nucleotide sequence