Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16330 and BWI76_RS16335 are separated by 177 nucleotides BWI76_RS16335 and BWI76_RS16340 are separated by 103 nucleotides BWI76_RS16340 and BWI76_RS16345 are separated by 220 nucleotides BWI76_RS16345 and BWI76_RS16350 are separated by 79 nucleotides
BWI76_RS16330: BWI76_RS16330 - oxidoreductase, at 3,389,727 to 3,390,767
_RS16330
BWI76_RS16335: BWI76_RS16335 - division septum protein Blr, at 3,390,945 to 3,391,094
_RS16335
BWI76_RS16340: BWI76_RS16340 - aryl-phospho-beta-D-glucosidase, at 3,391,198 to 3,392,568
_RS16340
BWI76_RS16345: BWI76_RS16345 - nucleoid-associated protein, at 3,392,789 to 3,393,004
_RS16345
BWI76_RS16350: BWI76_RS16350 - membrane protein, at 3,393,084 to 3,393,524
_RS16350
Position (kb)
3391
3392
3393 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3390.199 kb on - strand, within BWI76_RS16330 at 3390.437 kb on - strand, within BWI76_RS16330 at 3390.553 kb on - strand, within BWI76_RS16330 at 3390.856 kb on - strand at 3391.018 kb on - strand, within BWI76_RS16335 at 3391.100 kb on + strand at 3391.237 kb on + strand at 3391.303 kb on - strand at 3391.330 kb on - strand at 3392.157 kb on - strand, within BWI76_RS16340 at 3392.193 kb on + strand, within BWI76_RS16340 at 3392.214 kb on + strand, within BWI76_RS16340 at 3392.354 kb on - strand, within BWI76_RS16340 at 3392.390 kb on + strand, within BWI76_RS16340 at 3392.393 kb on - strand, within BWI76_RS16340 at 3392.398 kb on - strand, within BWI76_RS16340 at 3392.413 kb on - strand, within BWI76_RS16340 at 3392.414 kb on + strand, within BWI76_RS16340 at 3392.415 kb on - strand, within BWI76_RS16340 at 3392.472 kb on + strand at 3392.480 kb on - strand at 3392.562 kb on + strand at 3392.562 kb on + strand at 3392.617 kb on - strand at 3392.718 kb on + strand at 3392.723 kb on + strand at 3392.728 kb on + strand at 3392.728 kb on + strand at 3392.731 kb on - strand at 3392.736 kb on + strand at 3392.736 kb on - strand at 3392.743 kb on + strand at 3392.863 kb on + strand, within BWI76_RS16345 at 3392.871 kb on - strand, within BWI76_RS16345 at 3392.871 kb on - strand, within BWI76_RS16345 at 3392.873 kb on + strand, within BWI76_RS16345 at 3392.883 kb on + strand, within BWI76_RS16345 at 3392.913 kb on + strand, within BWI76_RS16345 at 3392.931 kb on - strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.974 kb on + strand, within BWI76_RS16345 at 3392.980 kb on - strand, within BWI76_RS16345 at 3392.982 kb on - strand, within BWI76_RS16345 at 3392.982 kb on - strand, within BWI76_RS16345 at 3393.006 kb on - strand at 3393.029 kb on + strand at 3393.029 kb on + strand at 3393.037 kb on - strand at 3393.145 kb on + strand, within BWI76_RS16350 at 3393.155 kb on + strand, within BWI76_RS16350 at 3393.158 kb on - strand, within BWI76_RS16350 at 3393.209 kb on + strand, within BWI76_RS16350 at 3393.219 kb on - strand, within BWI76_RS16350 at 3393.243 kb on + strand, within BWI76_RS16350 at 3393.254 kb on + strand, within BWI76_RS16350 at 3393.293 kb on - strand, within BWI76_RS16350 at 3393.295 kb on - strand, within BWI76_RS16350 at 3393.298 kb on - strand, within BWI76_RS16350 at 3393.383 kb on - strand, within BWI76_RS16350 at 3393.533 kb on + strand at 3393.551 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 3,390,199 - BWI76_RS16330 0.45 -0.2 3,390,437 - BWI76_RS16330 0.68 -0.3 3,390,553 - BWI76_RS16330 0.79 +0.3 3,390,856 - +0.8 3,391,018 - BWI76_RS16335 0.49 -0.1 3,391,100 + -0.1 3,391,237 + -0.5 3,391,303 - -1.1 3,391,330 - -0.9 3,392,157 - BWI76_RS16340 0.70 -1.7 3,392,193 + BWI76_RS16340 0.73 -2.6 3,392,214 + BWI76_RS16340 0.74 -0.7 3,392,354 - BWI76_RS16340 0.84 -1.4 3,392,390 + BWI76_RS16340 0.87 -0.7 3,392,393 - BWI76_RS16340 0.87 -0.9 3,392,398 - BWI76_RS16340 0.88 -2.6 3,392,413 - BWI76_RS16340 0.89 -1.0 3,392,414 + BWI76_RS16340 0.89 -0.7 3,392,415 - BWI76_RS16340 0.89 -2.3 3,392,472 + -0.6 3,392,480 - -0.7 3,392,562 + -0.6 3,392,562 + -0.7 3,392,617 - -0.1 3,392,718 + -0.1 3,392,723 + +1.8 3,392,728 + +0.4 3,392,728 + +0.3 3,392,731 - -2.1 3,392,736 + +0.1 3,392,736 - -1.0 3,392,743 + -2.4 3,392,863 + BWI76_RS16345 0.34 +0.5 3,392,871 - BWI76_RS16345 0.38 -0.4 3,392,871 - BWI76_RS16345 0.38 -0.8 3,392,873 + BWI76_RS16345 0.39 -0.5 3,392,883 + BWI76_RS16345 0.44 -0.9 3,392,913 + BWI76_RS16345 0.57 -0.1 3,392,931 - BWI76_RS16345 0.66 -0.3 3,392,974 + BWI76_RS16345 0.86 -0.5 3,392,974 + BWI76_RS16345 0.86 +0.5 3,392,974 + BWI76_RS16345 0.86 +0.2 3,392,974 + BWI76_RS16345 0.86 +0.1 3,392,974 + BWI76_RS16345 0.86 -0.7 3,392,974 + BWI76_RS16345 0.86 -0.5 3,392,974 + BWI76_RS16345 0.86 +0.1 3,392,974 + BWI76_RS16345 0.86 -0.1 3,392,974 + BWI76_RS16345 0.86 -0.0 3,392,974 + BWI76_RS16345 0.86 -1.1 3,392,974 + BWI76_RS16345 0.86 -0.4 3,392,980 - BWI76_RS16345 0.88 +0.3 3,392,982 - BWI76_RS16345 0.89 -0.7 3,392,982 - BWI76_RS16345 0.89 +0.2 3,393,006 - -0.0 3,393,029 + -1.1 3,393,029 + -0.0 3,393,037 - -0.1 3,393,145 + BWI76_RS16350 0.14 +0.6 3,393,155 + BWI76_RS16350 0.16 +0.3 3,393,158 - BWI76_RS16350 0.17 -1.1 3,393,209 + BWI76_RS16350 0.28 +0.0 3,393,219 - BWI76_RS16350 0.31 -0.1 3,393,243 + BWI76_RS16350 0.36 -0.5 3,393,254 + BWI76_RS16350 0.39 -0.3 3,393,293 - BWI76_RS16350 0.47 -0.4 3,393,295 - BWI76_RS16350 0.48 -0.2 3,393,298 - BWI76_RS16350 0.49 +0.7 3,393,383 - BWI76_RS16350 0.68 -0.0 3,393,533 + +0.3 3,393,551 - +0.9
Or see this region's nucleotide sequence