Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28775

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
6,262,564	+		AO353_28765	0.70	-0.9
6,262,564	+		AO353_28765	0.70	-0.4
6,262,564	+		AO353_28765	0.70	-0.6
6,262,564	+		AO353_28765	0.70	-0.5
6,262,564	+		AO353_28765	0.70	-1.1
6,262,564	+		AO353_28765	0.70	-1.2
6,262,564	+		AO353_28765	0.70	+0.6
6,262,564	+		AO353_28765	0.70	+2.7
6,262,565	-		AO353_28765	0.70	+1.4
6,262,593	+		AO353_28765	0.73	-2.2
6,262,593	+		AO353_28765	0.73	+1.4
6,262,593	+		AO353_28765	0.73	-1.2
6,262,594	-		AO353_28765	0.74	-0.0
6,262,594	-		AO353_28765	0.74	+0.5
6,262,741	-				-0.3
6,262,741	-				-0.9
6,262,759	+				-1.4
6,262,760	-				-1.5
6,262,760	-				+0.0
6,262,792	+				+0.0
6,262,792	+				+0.7
6,262,793	-				-0.5
6,262,793	-				+0.2
6,262,793	-				-0.1
6,262,793	-				+0.4
6,262,793	-				-1.4
6,262,793	-				+1.3
6,262,805	+				+0.5
6,262,805	+				-1.3
6,262,805	+				+1.0
6,262,805	+				-0.4
6,262,805	+				-1.9
6,262,805	+				+0.5
6,262,805	+				-0.4
6,262,805	+				-1.1
6,262,805	+				-0.3
6,262,805	+				-0.8
6,262,806	-				-2.6
6,262,806	-				-0.9
6,262,806	-				-0.0
6,262,868	+				+0.1
6,262,868	+				-0.2
6,262,869	-				-0.3
6,262,869	-				-0.8
6,262,869	-				-0.6
6,263,184	+				-0.2
6,263,184	+				+2.3
6,263,240	+				+0.7
6,263,240	+				+0.5
6,263,241	-				+0.8
6,263,241	-				-0.5
6,263,254	+				+0.1
6,263,254	+				+0.4
6,263,254	+				-0.6
6,263,254	+				+0.1
6,263,255	-				-0.1
6,263,255	-				-0.1
6,263,351	-				-1.4
6,263,351	-				-1.3
6,263,403	+				+1.1
6,263,403	+				-0.5
6,263,403	+				+0.6
6,263,403	+				-0.9
6,263,403	+				+0.2
6,263,404	-				-0.2
6,263,419	-				-1.4
6,263,452	+				-0.9
6,263,452	+				-0.6
6,263,452	+				-1.1
6,263,452	+				-0.1
6,263,452	+				+1.0
6,263,452	+				-0.1
6,263,452	+				-0.6
6,263,452	+				-0.8
6,263,452	+				+0.1
6,263,453	-				+0.5
6,263,453	-				-0.1
6,263,453	-				+0.1
6,263,453	-				+0.6
6,263,453	-				-0.5
6,263,453	-				-1.0
6,263,453	-				+1.5
6,263,453	-				-0.0
6,263,453	-				+0.1
6,263,453	-				-0.3
6,263,464	+				+0.4
6,263,464	+				+0.2
6,263,464	+				-1.2
6,263,506	+				+0.1
6,263,506	+				-0.5
6,263,507	-				-0.1
6,263,507	-				+1.1
6,263,533	+		AO353_28775	0.14	-1.9
6,263,533	+		AO353_28775	0.14	+1.2
6,263,533	+		AO353_28775	0.14	+0.6
6,263,533	+		AO353_28775	0.14	-0.9
6,263,533	+		AO353_28775	0.14	-0.5
6,263,533	+		AO353_28775	0.14	+1.1
6,263,534	-		AO353_28775	0.15	-0.6
6,263,534	-		AO353_28775	0.15	-0.4
6,263,534	-		AO353_28775	0.15	-2.3
6,263,534	-				-0.1
6,263,534	-		AO353_28775	0.15	-0.8
6,263,534	-		AO353_28775	0.15	-0.5
6,263,534	-		AO353_28775	0.15	+0.9
6,263,552	+		AO353_28775	0.18	-1.9
6,263,552	+		AO353_28775	0.18	-0.5
6,263,626	+		AO353_28775	0.34	-1.0
6,263,627	-		AO353_28775	0.34	+1.4
6,263,630	+		AO353_28775	0.34	-0.8
6,263,630	+		AO353_28775	0.34	-0.7
6,263,630	+		AO353_28775	0.34	-1.2
6,263,630	+		AO353_28775	0.34	-0.9
6,263,631	-		AO353_28775	0.35	+0.7
6,263,631	-		AO353_28775	0.35	-1.0
6,263,631	-		AO353_28775	0.35	-0.0
6,263,665	+		AO353_28775	0.42	+0.2
6,263,735	+		AO353_28775	0.56	-1.9
6,263,735	+		AO353_28775	0.56	+0.3
6,263,735	+		AO353_28775	0.56	-1.0
6,263,735	+		AO353_28775	0.56	-0.2
6,263,735	+		AO353_28775	0.56	-1.0
6,263,736	-		AO353_28775	0.56	-0.5
6,263,736	-		AO353_28775	0.56	-0.2
6,263,736	-		AO353_28775	0.56	+1.1
6,263,736	-		AO353_28775	0.56	-1.3
6,263,736	-		AO353_28775	0.56	-0.5
6,263,736	-		AO353_28775	0.56	-1.0
6,263,957	+				-0.2
6,263,957	+				+0.2
6,263,957	+				-1.2
6,263,957	+				+0.1
6,263,957	+				-0.0
6,263,957	+				+0.5
6,263,957	+				-0.3
6,263,989	-				-0.6
6,263,989	-				-0.9
6,263,989	-				-2.3
6,263,989	-				+0.6
6,264,138	+				-1.5
6,264,138	+				-2.0
6,264,138	+				-0.3
6,264,139	-				-1.0
6,264,139	-				+0.1
6,264,139	-				-2.1
6,264,166	-				-3.2
6,264,166	-				-0.5
6,264,202	-				-0.7
6,264,202	-				-0.7
6,264,202	-				+0.1
6,264,202	-				+0.1
6,264,204	+				-2.1
6,264,205	-				-0.0
6,264,211	+				+0.8
6,264,213	+				-1.6
6,264,213	+				-2.3
6,264,213	+				-0.5
6,264,214	-				+0.1
6,264,246	-				-0.2
6,264,264	+				-0.9
6,264,265	-				-0.7
6,264,298	-		AO353_28780	0.17	+0.5
6,264,298	-		AO353_28780	0.17	+1.4
6,264,301	+		AO353_28780	0.18	-1.4
6,264,302	-		AO353_28780	0.18	-0.8
6,264,367	+		AO353_28780	0.35	-0.5
6,264,407	+		AO353_28780	0.45	-1.3
6,264,408	-		AO353_28780	0.46	+2.0
6,264,414	+		AO353_28780	0.47	+0.4
6,264,454	+		AO353_28780	0.58	-2.0
6,264,482	-		AO353_28780	0.65	-1.5
6,264,482	-		AO353_28780	0.65	-1.2
6,264,534	+		AO353_28780	0.78	+0.7
6,264,535	-		AO353_28780	0.79	-1.8
6,264,535	-		AO353_28780	0.79	-2.3
6,264,612	+				+2.1
6,264,612	+				-0.4
6,264,612	+				+0.7
6,264,612	+				+0.2
6,264,613	-				-0.3
6,264,613	-				-1.0
6,264,613	-				-1.1
6,264,613	-				-0.6
6,264,614	+				-0.4
6,264,675	+				-0.4
6,264,675	+				+1.3
6,264,675	+				-0.4
6,264,696	+				-1.3
6,264,696	+				-1.1
6,264,696	+				-0.4
6,264,696	+				+0.9
6,264,697	-				-0.9
6,264,701	+				-0.5
6,264,701	+				-0.0
6,264,701	+				-0.7
6,264,702	-				+0.6
6,264,777	+				+1.1
6,264,778	-				-1.4
6,264,778	-				-0.7
6,264,778	-				-0.5
6,264,778	-				-0.3
6,264,781	+				-0.5
6,264,782	-				-1.3
6,264,782	-				-1.2
6,264,887	+				-1.0
6,264,888	-				-2.0
6,264,902	+				-0.9
6,264,902	+				-1.4
6,264,902	+				-2.9
6,264,902	+				+0.5
6,264,903	-				-0.6
6,264,903	-				-0.6
6,264,903	-				+0.4
6,264,903	-				-1.2