Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22480

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
4,930,376	-		AO353_22475	0.15	-1.0
4,930,376	-		AO353_22475	0.15	-1.1
4,930,403	+		AO353_22475	0.18	-1.9
4,930,403	+		AO353_22475	0.18	-0.9
4,930,404	-		AO353_22475	0.18	+1.8
4,930,475	+		AO353_22475	0.27	-1.0
4,930,475	+		AO353_22475	0.27	-0.1
4,930,475	+		AO353_22475	0.27	-1.3
4,930,476	-		AO353_22475	0.27	-1.6
4,930,476	-		AO353_22475	0.27	-1.0
4,930,651	-		AO353_22475	0.50	-2.0
4,931,173	+				-0.1
4,931,233	+				-1.9
4,931,234	-				-0.9
4,931,271	-				+0.3
4,931,271	-				+0.0
4,931,275	+				-2.1
4,931,275	+				+0.1
4,931,275	+				-0.2
4,931,275	+				-0.3
4,931,276	-				-0.9
4,931,276	-				+0.3
4,931,282	+				-0.7
4,931,282	+				-0.3
4,931,288	+				-0.9
4,931,288	+				-0.5
4,931,288	+				-0.3
4,931,288	+				-0.8
4,931,289	-				+1.1
4,931,289	-				+1.1
4,931,289	-				-0.4
4,931,295	+				+0.1
4,931,295	+				-0.1
4,931,295	+				+0.7
4,931,295	+				+0.4
4,931,295	+				+0.1
4,931,295	+				+0.1
4,931,295	+				-0.7
4,931,296	-				-0.9
4,931,296	-				+0.1
4,931,296	-				-0.2
4,931,296	-				-0.5
4,931,296	-				+0.0
4,931,296	-				+0.3
4,931,296	-				-0.2
4,931,296	-				+0.6
4,931,296	-				+0.1
4,931,296	-				+0.2
4,931,296	-				-0.0
4,931,296	-				+1.1
4,931,296	-				-0.3
4,931,296	-				+0.1
4,931,296	-				+0.1
4,931,297	+				+0.1
4,931,297	+				-1.0
4,931,298	-				-1.7
4,931,298	-				+0.5
4,931,298	-				-0.1
4,931,372	+				-1.0
4,931,372	+				+0.5
4,931,373	-				-0.7
4,931,373	-				+0.5
4,931,373	-				+0.3
4,931,374	+				-0.1
4,931,494	-		AO353_22480	0.15	-0.3
4,931,599	-		AO353_22480	0.23	-0.7
4,931,670	+		AO353_22480	0.29	+1.1
4,931,670	+		AO353_22480	0.29	-0.6
4,931,670	+		AO353_22480	0.29	-0.9
4,931,670	+		AO353_22480	0.29	+0.1
4,931,671	-		AO353_22480	0.29	-0.7
4,931,671	-		AO353_22480	0.29	-0.1
4,931,671	-		AO353_22480	0.29	+1.1
4,931,708	+		AO353_22480	0.32	-2.7
4,931,709	-		AO353_22480	0.32	-0.9
4,931,709	-		AO353_22480	0.32	-1.8
4,931,709	-		AO353_22480	0.32	-1.8
4,931,709	-		AO353_22480	0.32	-1.4
4,931,709	-		AO353_22480	0.32	-2.6
4,931,709	-		AO353_22480	0.32	-1.1
4,931,754	+		AO353_22480	0.35	-1.6
4,931,754	+		AO353_22480	0.35	-0.0
4,931,754	+		AO353_22480	0.35	-1.1
4,931,755	-		AO353_22480	0.35	-0.5
4,931,808	+		AO353_22480	0.40	+0.1
4,931,808	+		AO353_22480	0.40	+0.7
4,931,808	+		AO353_22480	0.40	-1.3
4,931,808	+		AO353_22480	0.40	+0.9
4,931,808	+		AO353_22480	0.40	-0.6
4,931,808	+		AO353_22480	0.40	-0.2
4,931,809	-				-0.1
4,931,832	+		AO353_22480	0.41	-0.3
4,931,832	+		AO353_22480	0.41	+0.0
4,931,833	-		AO353_22480	0.42	-0.1
4,931,833	-		AO353_22480	0.42	+0.4
4,931,833	-		AO353_22480	0.42	+0.0
4,931,833	-		AO353_22480	0.42	-1.5
4,931,841	+		AO353_22480	0.42	+0.1
4,931,842	-		AO353_22480	0.42	+1.0
4,931,842	-		AO353_22480	0.42	+1.0
4,931,842	-		AO353_22480	0.42	-0.6
4,931,862	+		AO353_22480	0.44	-0.5
4,931,863	-		AO353_22480	0.44	-0.1
4,931,895	+		AO353_22480	0.46	+0.7
4,931,896	-		AO353_22480	0.46	-1.6
4,931,901	+		AO353_22480	0.47	-1.2
4,931,901	+		AO353_22480	0.47	+0.6
4,931,902	-		AO353_22480	0.47	+0.1
4,931,902	-		AO353_22480	0.47	-0.6
4,931,902	-		AO353_22480	0.47	+0.0
4,931,955	+		AO353_22480	0.51	+1.0
4,931,955	+		AO353_22480	0.51	-0.6
4,931,955	+		AO353_22480	0.51	-0.2
4,931,955	+		AO353_22480	0.51	-0.6
4,931,955	+		AO353_22480	0.51	+0.1
4,931,955	+		AO353_22480	0.51	-0.7
4,931,955	+		AO353_22480	0.51	-0.7
4,931,955	+		AO353_22480	0.51	-1.8
4,931,956	-		AO353_22480	0.51	-1.1
4,931,956	-		AO353_22480	0.51	+1.0
4,931,956	-		AO353_22480	0.51	-0.6
4,931,956	-		AO353_22480	0.51	-0.1
4,931,988	+		AO353_22480	0.54	+1.5
4,931,988	+		AO353_22480	0.54	+0.2
4,931,988	+		AO353_22480	0.54	+0.3
4,931,989	-		AO353_22480	0.54	+0.4
4,931,989	-		AO353_22480	0.54	-0.9
4,931,989	-		AO353_22480	0.54	-0.1
4,932,002	+		AO353_22480	0.55	+0.1
4,932,002	+		AO353_22480	0.55	-0.5
4,932,002	+		AO353_22480	0.55	-1.1
4,932,002	+		AO353_22480	0.55	-1.6
4,932,002	+		AO353_22480	0.55	-0.0
4,932,002	+		AO353_22480	0.55	+0.1
4,932,002	+		AO353_22480	0.55	+0.1
4,932,002	+		AO353_22480	0.55	+0.5
4,932,002	+		AO353_22480	0.55	-0.8
4,932,003	-		AO353_22480	0.55	-1.2
4,932,003	-		AO353_22480	0.55	+1.7
4,932,003	-		AO353_22480	0.55	+0.6
4,932,003	-		AO353_22480	0.55	+0.4
4,932,003	-		AO353_22480	0.55	-0.1
4,932,003	-		AO353_22480	0.55	-0.5
4,932,025	+		AO353_22480	0.57	+1.0
4,932,050	+		AO353_22480	0.58	+0.0
4,932,051	-		AO353_22480	0.59	-1.0
4,932,114	+		AO353_22480	0.63	-0.5
4,932,115	-		AO353_22480	0.64	+0.0
4,932,171	+		AO353_22480	0.68	-1.6
4,932,171	+		AO353_22480	0.68	+0.7
4,932,172	-		AO353_22480	0.68	+0.7
4,932,234	+		AO353_22480	0.73	-0.2
4,932,234	+		AO353_22480	0.73	-0.5
4,932,234	+		AO353_22480	0.73	-0.5
4,932,235	-		AO353_22480	0.73	+0.8
4,932,235	-		AO353_22480	0.73	+0.7
4,932,235	-		AO353_22480	0.73	+1.1
4,932,235	-				+0.9
4,932,246	+		AO353_22480	0.74	-0.5
4,932,271	-		AO353_22480	0.76	+1.7
4,932,271	-		AO353_22480	0.76	-0.4
4,932,271	-		AO353_22480	0.76	+0.2
4,932,305	-		AO353_22480	0.78	+0.7
4,932,305	-		AO353_22480	0.78	+0.0
4,932,305	-		AO353_22480	0.78	-0.9
4,932,305	-		AO353_22480	0.78	+0.3
4,932,471	-				+0.0
4,932,549	+				+0.1
4,932,550	-				+1.3
4,932,550	-				-0.7
4,932,550	-				-0.5
4,932,662	+				-2.7
4,932,663	-				-0.3
4,932,663	-				-1.5
4,932,663	-				+0.4
4,932,663	-				-1.0
4,932,681	+				-1.9
4,932,681	+				-0.5
4,932,681	+				-0.5
4,932,681	+				+0.4
4,932,682	-				-1.4
4,932,682	-				+0.2
4,932,702	+				+0.5
4,932,702	+				+0.8
4,932,703	-				-0.9
4,932,703	-				+0.8
4,932,960	+		AO353_22485	0.55	-2.1
4,932,960	+		AO353_22485	0.55	-0.7
4,932,961	-		AO353_22485	0.55	-0.7
4,932,961	-		AO353_22485	0.55	-0.6
4,933,059	-		AO353_22485	0.77	-1.4
4,933,059	-		AO353_22485	0.77	-0.2
4,933,059	-		AO353_22485	0.77	+0.5
4,933,109	-		AO353_22485	0.88	+0.2
4,933,111	+				+1.1
4,933,111	+		AO353_22485	0.89	-0.5
4,933,112	-		AO353_22485	0.89	-0.5
4,933,112	-		AO353_22485	0.89	-1.5
4,933,112	-		AO353_22485	0.89	-0.2
4,933,112	-		AO353_22485	0.89	+0.1
4,933,112	-		AO353_22485	0.89	+1.5
4,933,112	-		AO353_22485	0.89	-3.2
4,933,127	+				-0.6
4,933,127	+				+0.3
4,933,127	+				+0.9
4,933,127	+				-0.5
4,933,128	-				+0.3
4,933,128	-				+0.3
4,933,128	-				-0.6
4,933,137	+				+0.7
4,933,138	-				+0.9
4,933,138	-				-0.3
4,933,157	+				+2.1
4,933,252	+				-1.2
4,933,253	-				+1.7
4,933,253	-				-0.9
4,933,253	-				-0.7
4,933,289	+				-0.3
4,933,289	+				+0.8
4,933,289	+				-0.5
4,933,290	-				-2.3
4,933,290	-				-0.6
4,933,334	+				-0.9
4,933,343	+				-1.7
4,933,343	+				-0.6
4,933,343	+				-0.6
4,933,343	+				-0.3
4,933,343	+				-1.5
4,933,344	-				-1.4
4,933,344	-				-1.3
4,933,344	-				-0.5
4,933,344	-				+0.6
4,933,344	-				-0.5
4,933,379	+				-0.9
4,933,379	+				+0.5
4,933,379	+				-0.5
4,933,379	+				-0.0
4,933,380	-				-0.6
4,933,380	-				+1.1
4,933,380	-				+1.0
4,933,391	-				-1.9
4,933,391	-				-0.7
4,933,391	-				+0.8
4,933,391	-				-0.7
4,933,449	+		AO353_22490	0.23	-0.6
4,933,450	-		AO353_22490	0.23	+1.7