Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21680

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
4,754,010	-		AO353_21675	0.53	-0.4
4,754,044	+		AO353_21675	0.55	-1.2
4,754,044	+		AO353_21675	0.55	+0.0
4,754,113	+		AO353_21675	0.59	-0.0
4,754,113	+		AO353_21675	0.59	+1.3
4,754,634	-				+0.7
4,754,634	-				+0.6
4,754,634	-				-1.1
4,754,655	-				-0.3
4,754,723	+				-1.2
4,754,723	+				+0.6
4,754,723	+				-0.4
4,754,723	+				-0.4
4,754,723	+				-0.6
4,754,724	-				+0.7
4,754,726	+				+0.3
4,754,726	+				-1.3
4,754,727	-				-1.0
4,754,727	-				-0.3
4,754,727	-				+0.6
4,754,777	+				-1.9
4,754,855	+				-0.9
4,754,856	-				-1.6
4,754,856	-				+0.4
4,754,856	-				-0.7
4,754,856	-				+0.5
4,754,856	-				-4.2
4,754,910	+				+0.2
4,754,911	-				-0.5
4,754,911	-				+0.7
4,754,911	-				+0.6
4,754,911	-				-0.6
4,754,924	+				-1.3
4,754,924	+				+0.4
4,754,924	+				-0.6
4,754,925	-				-1.2
4,754,925	-				-1.7
4,754,925	-				-0.6
4,754,936	+				+0.4
4,754,936	+				+1.1
4,754,936	+				-0.6
4,754,936	+				+0.6
4,754,937	-				+0.2
4,754,937	-				+0.5
4,754,937	-				-1.2
4,754,937	-				+0.9
4,754,937	-				+1.2
4,754,977	+				+2.0
4,754,978	-				+0.6
4,755,063	+				-0.2
4,755,136	+		AO353_21680	0.14	+0.5
4,755,136	+		AO353_21680	0.14	+0.1
4,755,137	-		AO353_21680	0.14	-1.1
4,755,167	-		AO353_21680	0.16	-1.3
4,755,191	-		AO353_21680	0.18	-0.1
4,755,225	+		AO353_21680	0.20	+0.4
4,755,274	+		AO353_21680	0.23	-1.9
4,755,275	-		AO353_21680	0.23	+0.7
4,755,275	-		AO353_21680	0.23	+0.0
4,755,359	+		AO353_21680	0.29	-0.8
4,755,359	+		AO353_21680	0.29	+2.1
4,755,360	-		AO353_21680	0.29	-1.9
4,755,360	-		AO353_21680	0.29	+0.7
4,755,511	+		AO353_21680	0.38	-1.8
4,755,553	+		AO353_21680	0.41	-0.2
4,755,553	+		AO353_21680	0.41	+0.4
4,755,553	+		AO353_21680	0.41	-0.5
4,755,553	+		AO353_21680	0.41	+1.0
4,755,553	+		AO353_21680	0.41	+1.3
4,755,553	+		AO353_21680	0.41	+1.3
4,755,553	+		AO353_21680	0.41	+1.1
4,755,553	+		AO353_21680	0.41	-1.1
4,755,554	-		AO353_21680	0.41	+0.7
4,755,554	-		AO353_21680	0.41	+0.6
4,755,554	-		AO353_21680	0.41	-0.6
4,755,554	-		AO353_21680	0.41	-0.6
4,755,844	+		AO353_21680	0.60	+0.0
4,755,844	+		AO353_21680	0.60	+1.3
4,755,844	+		AO353_21680	0.60	+0.0
4,755,845	-		AO353_21680	0.60	-1.4
4,755,846	+		AO353_21680	0.60	+0.5
4,755,846	+		AO353_21680	0.60	+0.4
4,755,846	+		AO353_21680	0.60	+0.3
4,755,846	+		AO353_21680	0.60	-1.6
4,755,846	+		AO353_21680	0.60	-1.1
4,755,846	+		AO353_21680	0.60	+1.1
4,755,846	+		AO353_21680	0.60	-0.7
4,755,847	-		AO353_21680	0.60	+1.0
4,755,847	-		AO353_21680	0.60	+1.5
4,755,847	-		AO353_21680	0.60	+0.4
4,755,847	-		AO353_21680	0.60	-0.7
4,755,847	-		AO353_21680	0.60	+0.5
4,755,850	+		AO353_21680	0.60	-0.3
4,755,850	+		AO353_21680	0.60	-0.6
4,755,850	+		AO353_21680	0.60	-1.5
4,755,850	+		AO353_21680	0.60	-0.3
4,755,850	+		AO353_21680	0.60	+0.5
4,755,851	-		AO353_21680	0.60	-0.4
4,755,851	-		AO353_21680	0.60	-0.8
4,755,851	-		AO353_21680	0.60	-1.1
4,755,859	-		AO353_21680	0.61	-0.3
4,755,859	-		AO353_21680	0.61	+0.1
4,755,944	+		AO353_21680	0.66	+1.3
4,755,944	+		AO353_21680	0.66	+1.1
4,755,945	-		AO353_21680	0.66	-1.4
4,755,945	-		AO353_21680	0.66	-0.0
4,756,027	-		AO353_21680	0.71	+0.6
4,756,027	-		AO353_21680	0.71	+0.2
4,756,027	-		AO353_21680	0.71	+1.4
4,756,138	+		AO353_21680	0.78	-1.3
4,756,138	+		AO353_21680	0.78	-1.4
4,756,139	-		AO353_21680	0.79	-1.5
4,756,139	-		AO353_21680	0.79	+0.4
4,756,192	+		AO353_21680	0.82	-0.4
4,756,192	+		AO353_21680	0.82	-0.3
4,756,193	-		AO353_21680	0.82	+0.3
4,756,240	+		AO353_21680	0.85	+0.3
4,756,240	+		AO353_21680	0.85	-0.6
4,756,240	+		AO353_21680	0.85	+0.1
4,756,240	+		AO353_21680	0.85	+0.9
4,756,241	-		AO353_21680	0.85	-0.1
4,756,241	-		AO353_21680	0.85	+0.1
4,756,241	-		AO353_21680	0.85	+0.1
4,756,241	-		AO353_21680	0.85	+0.1
4,756,241	-		AO353_21680	0.85	-1.1
4,756,241	-		AO353_21680	0.85	-2.3
4,756,485	+				+0.8
4,756,485	+				-1.8
4,756,485	+				+0.7
4,756,485	+				-0.6
4,756,485	+				-0.5
4,756,486	-				+0.1
4,756,486	-				-1.6
4,756,486	-				-0.5
4,756,486	-				-1.4
4,756,583	+		AO353_21685	0.15	+0.6
4,756,620	+		AO353_21685	0.20	-1.9
4,756,620	+		AO353_21685	0.20	+0.7
4,756,743	+		AO353_21685	0.37	+2.7
4,756,743	+		AO353_21685	0.37	+1.9
4,756,743	+		AO353_21685	0.37	+0.0
4,756,743	+		AO353_21685	0.37	-0.6
4,756,743	+		AO353_21685	0.37	-0.4
4,756,743	+		AO353_21685	0.37	-2.6
4,756,743	+		AO353_21685	0.37	+0.3
4,756,743	+		AO353_21685	0.37	+0.5
4,756,743	+		AO353_21685	0.37	-0.3
4,756,743	+		AO353_21685	0.37	-1.1
4,756,743	+		AO353_21685	0.37	-0.3
4,756,743	+		AO353_21685	0.37	+0.1
4,756,744	-		AO353_21685	0.37	+3.0
4,756,744	-		AO353_21685	0.37	-1.9
4,756,744	-		AO353_21685	0.37	-1.2
4,756,744	-		AO353_21685	0.37	+0.7
4,756,744	-		AO353_21685	0.37	-1.4
4,756,744	-		AO353_21685	0.37	-2.4
4,756,744	-		AO353_21685	0.37	+0.6
4,756,744	-		AO353_21685	0.37	+1.7
4,756,744	-		AO353_21685	0.37	-0.3
4,756,744	-		AO353_21685	0.37	-1.1
4,756,744	-		AO353_21685	0.37	+0.6
4,756,744	-		AO353_21685	0.37	+1.5
4,756,744	-		AO353_21685	0.37	-0.9
4,756,744	-		AO353_21685	0.37	-1.5
4,756,744	-		AO353_21685	0.37	-1.8
4,756,744	-		AO353_21685	0.37	+0.7
4,756,744	-		AO353_21685	0.37	+0.9
4,756,744	-		AO353_21685	0.37	+0.1
4,756,744	-		AO353_21685	0.37	-0.2
4,756,744	-		AO353_21685	0.37	+0.6
4,756,744	-		AO353_21685	0.37	-0.1
4,756,744	-		AO353_21685	0.37	-0.2
4,756,744	-		AO353_21685	0.37	-0.8
4,756,744	-		AO353_21685	0.37	+0.4
4,756,744	-		AO353_21685	0.37	+0.6
4,756,744	-		AO353_21685	0.37	-1.5
4,756,744	-		AO353_21685	0.37	-0.3
4,756,744	-		AO353_21685	0.37	+0.2
4,756,747	+		AO353_21685	0.37	-2.0
4,756,747	+		AO353_21685	0.37	-0.3
4,756,747	+		AO353_21685	0.37	+0.4
4,756,747	+		AO353_21685	0.37	+1.9
4,756,747	+		AO353_21685	0.37	-0.4
4,756,747	+				+0.7
4,756,747	+		AO353_21685	0.37	+1.0
4,756,748	+		AO353_21685	0.37	+0.1
4,756,748	-		AO353_21685	0.37	+0.7
4,756,748	-		AO353_21685	0.37	-0.1
4,756,748	-		AO353_21685	0.37	-0.1
4,756,748	-		AO353_21685	0.37	-0.7
4,756,748	-		AO353_21685	0.37	-1.0
4,756,748	-		AO353_21685	0.37	-0.6
4,756,852	+		AO353_21685	0.52	+0.5
4,756,904	+		AO353_21685	0.59	+0.4
4,756,905	-		AO353_21685	0.59	-0.8
4,757,006	+		AO353_21685	0.73	-0.6
4,757,007	-		AO353_21685	0.73	+1.7
4,757,007	-		AO353_21685	0.73	+0.7
4,757,025	+		AO353_21685	0.76	-0.4
4,757,026	-		AO353_21685	0.76	-1.5
4,757,026	-		AO353_21685	0.76	+0.1
4,757,026	-		AO353_21685	0.76	-1.6
4,757,026	-		AO353_21685	0.76	-0.6
4,757,026	-		AO353_21685	0.76	+2.3
4,757,026	-		AO353_21685	0.76	-0.9
4,757,227	+				-1.3
4,757,228	-				-1.9
4,757,246	+				+1.7
4,757,246	+				+0.4
4,757,247	-				+0.4
4,757,260	-				-1.6
4,757,304	+				-3.0
4,757,305	-				-1.7
4,757,305	-				-0.6
4,757,305	-				-0.2
4,757,305	-				-1.2
4,757,305	-				-0.3
4,757,305	-				+0.1
4,757,305	-				-1.1
4,757,305	-				-1.9
4,757,305	-				-3.0
4,757,305	-				-1.1
4,757,305	-				+0.7