Strain Fitness in Shewanella amazonensis SB2B around Sama_0354

Experiment: 5-Hydroxymethylfurfural 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSama_0353 and murG are separated by 0 nucleotidesmurG and murC are separated by 9 nucleotides Sama_0353: Sama_0353 - cell division protein FtsW (RefSeq), at 423,163 to 424,371 _0353 Sama_0354: murG - undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase (RefSeq), at 424,372 to 425,454 murG Sama_0355: murC - UDP-N-acetylmuramate--L-alanine ligase (RefSeq), at 425,464 to 426,918 murC Position (kb) 424 425 426Strain fitness (log2 ratio) -1 0 1at 425.452 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 5-Hydroxymethylfurfural 20 mM
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425,452 + -0.5

Or see this region's nucleotide sequence