Strain Fitness in Shewanella oneidensis MR-1 around SO2448

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,562,376	+				-0.7
2,562,496	+				+0.4
2,562,496	+				-0.4
2,562,504	-				+3.8
2,562,506	+				-0.1
2,562,506	+				-1.0
2,562,506	+				+0.2
2,562,506	+				-3.0
2,562,506	+				+2.4
2,562,506	+				+0.6
2,562,506	+				+0.6
2,562,514	-				+0.4
2,562,514	-				-0.3
2,562,514	-				-0.4
2,562,514	-				+0.8
2,562,514	-				-0.3
2,562,514	-				+0.0
2,562,514	-				+1.0
2,562,532	+				-0.1
2,562,619	+		SO2447	0.11	-1.0
2,562,854	-		SO2447	0.47	-0.1
2,562,862	-		SO2447	0.48	+0.1
2,562,878	+		SO2447	0.51	+0.2
2,563,089	-		SO2447	0.83	-1.0
2,563,089	-		SO2447	0.83	-0.3
2,563,101	-		SO2447	0.85	-0.5
2,563,207	+				+0.7
2,563,215	-				+0.7
2,563,215	-				-0.3
2,563,305	-				-0.1
2,563,312	+				-0.1
2,563,426	+		SO2448	0.19	-0.5
2,563,478	+		SO2448	0.29	+0.3
2,563,494	+		SO2448	0.32	-1.3
2,563,606	+		SO2448	0.53	-1.4
2,563,961	-				-0.3
2,564,103	+		SO2449	0.16	+0.4
2,564,105	-		SO2449	0.16	-0.5
2,564,160	-		SO2449	0.23	+0.1
2,564,162	+		SO2449	0.23	+0.3
2,564,295	-		SO2449	0.41	-0.4
2,564,362	+		SO2449	0.50	+0.3
2,564,418	+		SO2449	0.57	+0.0
2,564,438	-		SO2449	0.60	-0.4
2,564,438	-		SO2449	0.60	-1.0
2,564,622	+		SO2449	0.84	+0.2
2,564,836	-				+0.3