Strain Fitness in Shewanella oneidensis MR-1 around SO1935

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,040,665	+				-0.1
2,040,665	+				-0.7
2,040,673	-				+0.2
2,040,734	+				-0.7
2,040,734	+				-0.2
2,040,742	-				-0.2
2,040,742	-				-0.1
2,040,806	+				+0.4
2,040,806	+				-0.4
2,040,806	+				+0.9
2,040,877	+				+0.8
2,040,910	-				+0.2
2,040,968	+	rnk	SO1935	0.14	-1.7
2,041,020	+	rnk	SO1935	0.26	-2.6
2,041,335	+				+0.3
2,041,358	-				-0.2
2,041,410	-				+0.3
2,041,511	+		SO1936	0.29	+0.4
2,041,578	+		SO1936	0.42	+0.6