Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c23500 and PGA1_c23510 are separated by 45 nucleotides PGA1_c23510 and PGA1_c23520 are separated by 157 nucleotides
PGA1_c23500: PGA1_c23500 - phosphoenolpyruvate-protein phosphotransferase PtsP, at 2,447,079 to 2,449,319
_c23500
PGA1_c23510: PGA1_c23510 - aspartokinase LysC, at 2,449,365 to 2,450,603
_c23510
PGA1_c23520: PGA1_c23520 - trk system potassium uptake protein, at 2,450,761 to 2,452,209
_c23520
Position (kb)
2449
2450
2451 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2448.365 kb on - strand, within PGA1_c23500 at 2448.393 kb on - strand, within PGA1_c23500 at 2448.441 kb on - strand, within PGA1_c23500 at 2448.508 kb on + strand, within PGA1_c23500 at 2448.565 kb on + strand, within PGA1_c23500 at 2448.575 kb on + strand, within PGA1_c23500 at 2448.616 kb on - strand, within PGA1_c23500 at 2448.638 kb on + strand, within PGA1_c23500 at 2448.699 kb on + strand, within PGA1_c23500 at 2448.743 kb on - strand, within PGA1_c23500 at 2448.905 kb on + strand, within PGA1_c23500 at 2448.907 kb on + strand, within PGA1_c23500 at 2448.907 kb on + strand, within PGA1_c23500 at 2448.907 kb on + strand, within PGA1_c23500 at 2448.915 kb on - strand, within PGA1_c23500 at 2448.925 kb on - strand, within PGA1_c23500 at 2449.153 kb on - strand at 2449.153 kb on - strand at 2449.160 kb on - strand at 2449.236 kb on + strand at 2449.244 kb on - strand at 2449.244 kb on - strand at 2449.344 kb on - strand at 2449.344 kb on - strand at 2449.358 kb on + strand at 2449.358 kb on + strand at 2449.365 kb on - strand at 2449.366 kb on - strand at 2450.738 kb on + strand at 2450.759 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,448,365 - PGA1_c23500 0.57 +3.7 2,448,393 - PGA1_c23500 0.59 +3.8 2,448,441 - PGA1_c23500 0.61 +3.5 2,448,508 + PGA1_c23500 0.64 +3.1 2,448,565 + PGA1_c23500 0.66 +3.4 2,448,575 + PGA1_c23500 0.67 +3.5 2,448,616 - PGA1_c23500 0.69 +3.4 2,448,638 + PGA1_c23500 0.70 +3.0 2,448,699 + PGA1_c23500 0.72 +3.6 2,448,743 - PGA1_c23500 0.74 +3.6 2,448,905 + PGA1_c23500 0.81 +3.0 2,448,907 + PGA1_c23500 0.82 +3.2 2,448,907 + PGA1_c23500 0.82 +3.7 2,448,907 + PGA1_c23500 0.82 +3.4 2,448,915 - PGA1_c23500 0.82 +3.4 2,448,925 - PGA1_c23500 0.82 +3.4 2,449,153 - +3.5 2,449,153 - +3.6 2,449,160 - +3.4 2,449,236 + +3.4 2,449,244 - +3.5 2,449,244 - +3.9 2,449,344 - +2.2 2,449,344 - +2.2 2,449,358 + +3.2 2,449,358 + +3.5 2,449,365 - +2.4 2,449,366 - +3.3 2,450,738 + +1.3 2,450,759 + -0.2
Or see this region's nucleotide sequence