Strain Fitness in Shewanella amazonensis SB2B around Sama_3094

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,667,368	-		Sama_3093	0.32	-0.7
3,667,368	-		Sama_3093	0.32	-0.8
3,667,384	+		Sama_3093	0.33	+0.6
3,667,384	+		Sama_3093	0.33	+0.4
3,667,384	+		Sama_3093	0.33	-0.0
3,667,385	-		Sama_3093	0.33	-0.3
3,667,385	-		Sama_3093	0.33	-0.3
3,667,412	-		Sama_3093	0.35	-0.3
3,667,412	-		Sama_3093	0.35	-0.7
3,667,419	+		Sama_3093	0.36	+1.1
3,667,457	+		Sama_3093	0.38	+1.7
3,667,458	-		Sama_3093	0.38	+0.3
3,667,458	-		Sama_3093	0.38	-0.4
3,667,464	+		Sama_3093	0.39	+0.2
3,667,464	+		Sama_3093	0.39	-0.8
3,667,464	+		Sama_3093	0.39	+0.9
3,667,464	+		Sama_3093	0.39	-0.8
3,667,464	+		Sama_3093	0.39	+0.1
3,667,465	-		Sama_3093	0.39	-0.2
3,667,465	-		Sama_3093	0.39	-0.3
3,667,465	-		Sama_3093	0.39	+0.9
3,667,465	-		Sama_3093	0.39	+0.3
3,667,465	-		Sama_3093	0.39	+0.3
3,667,465	-		Sama_3093	0.39	+0.5
3,667,465	-		Sama_3093	0.39	+0.3
3,667,465	-		Sama_3093	0.39	+0.8
3,667,465	-		Sama_3093	0.39	-0.4
3,667,465	-		Sama_3093	0.39	+0.5
3,667,471	+		Sama_3093	0.39	-0.6
3,667,472	-		Sama_3093	0.39	-0.6
3,667,553	+		Sama_3093	0.45	+0.7
3,667,648	+		Sama_3093	0.52	+0.4
3,667,648	+		Sama_3093	0.52	-1.5
3,667,817	+		Sama_3093	0.65	+0.7
3,667,817	+		Sama_3093	0.65	-0.2
3,667,909	+		Sama_3093	0.72	+0.1
3,667,909	+		Sama_3093	0.72	+0.2
3,667,909	+		Sama_3093	0.72	+0.3
3,667,909	+		Sama_3093	0.72	+0.4
3,667,910	-		Sama_3093	0.72	+0.7
3,667,984	+		Sama_3093	0.77	-0.6
3,667,984	+		Sama_3093	0.77	-1.3
3,667,984	+		Sama_3093	0.77	-0.1
3,667,985	-		Sama_3093	0.77	+0.4
3,667,985	-		Sama_3093	0.77	-1.4
3,667,985	-		Sama_3093	0.77	+0.1
3,667,985	-		Sama_3093	0.77	+0.3
3,667,994	+		Sama_3093	0.78	-1.7
3,667,994	+		Sama_3093	0.78	-0.2
3,667,994	+		Sama_3093	0.78	+0.0
3,667,994	+		Sama_3093	0.78	-0.7
3,667,995	-		Sama_3093	0.78	+0.2
3,667,995	-		Sama_3093	0.78	+0.2
3,667,995	-		Sama_3093	0.78	+0.2
3,667,995	-		Sama_3093	0.78	+0.1
3,667,995	-		Sama_3093	0.78	+0.5
3,668,009	+		Sama_3093	0.79	+0.4
3,668,075	+		Sama_3093	0.84	-1.0
3,668,116	+		Sama_3093	0.87	-0.1
3,668,116	+		Sama_3093	0.87	+0.0
3,668,116	+		Sama_3093	0.87	-1.4
3,668,117	-		Sama_3093	0.87	+0.1
3,668,117	-		Sama_3093	0.87	-0.3
3,668,117	-		Sama_3093	0.87	-0.0
3,668,117	-		Sama_3093	0.87	-0.2
3,668,138	+		Sama_3093	0.88	-0.4
3,668,138	+		Sama_3093	0.88	-0.2
3,668,138	+		Sama_3093	0.88	-1.1
3,668,183	+				+0.1
3,668,220	-				+0.7
3,668,387	+		Sama_3094	0.25	-0.2
3,668,387	+		Sama_3094	0.25	+2.0
3,668,388	-		Sama_3094	0.25	-0.9
3,668,388	-		Sama_3094	0.25	+1.4
3,668,444	+		Sama_3094	0.39	-2.7
3,668,444	+		Sama_3094	0.39	+0.3
3,668,498	-		Sama_3094	0.52	-0.7
3,668,498	-		Sama_3094	0.52	-2.7
3,668,644	+		Sama_3094	0.88	+0.3
3,668,645	-		Sama_3094	0.88	-0.2
3,668,664	+				-1.7
3,668,664	+				+1.4
3,668,664	+				+0.1
3,668,664	+				-0.5
3,668,664	+				-0.0
3,668,664	+				-0.1
3,668,664	+				+0.2
3,668,665	-				+0.1
3,668,665	-				+0.7
3,668,665	-				-1.3
3,668,665	-				+0.5
3,668,816	+				+0.5
3,668,885	-		Sama_3095	0.10	+0.5
3,668,885	-		Sama_3095	0.10	+0.3
3,668,885	-		Sama_3095	0.10	-1.9
3,668,885	-		Sama_3095	0.10	+0.1
3,668,885	-		Sama_3095	0.10	+0.3
3,668,885	-		Sama_3095	0.10	+0.6
3,668,901	-		Sama_3095	0.12	+0.7
3,668,955	-		Sama_3095	0.18	-0.3
3,668,987	+		Sama_3095	0.22	-0.1
3,668,988	-		Sama_3095	0.22	-0.1
3,668,988	-		Sama_3095	0.22	-0.4
3,668,988	-		Sama_3095	0.22	-0.7
3,669,000	+		Sama_3095	0.24	-1.5
3,669,033	-		Sama_3095	0.27	+0.3
3,669,033	-		Sama_3095	0.27	-0.4
3,669,159	-		Sama_3095	0.42	+0.2
3,669,282	+		Sama_3095	0.56	-0.4
3,669,298	+		Sama_3095	0.58	+0.7
3,669,298	+		Sama_3095	0.58	-0.3
3,669,298	+		Sama_3095	0.58	-0.7
3,669,298	+		Sama_3095	0.58	+0.2
3,669,298	+		Sama_3095	0.58	+0.1
3,669,299	-		Sama_3095	0.58	-1.1
3,669,299	-		Sama_3095	0.58	-0.3
3,669,299	-		Sama_3095	0.58	+0.0
3,669,299	-		Sama_3095	0.58	-1.1
3,669,299	-		Sama_3095	0.58	-0.2
3,669,346	-		Sama_3095	0.63	+0.3
3,669,388	-		Sama_3095	0.68	-0.8
3,669,463	+		Sama_3095	0.77	-0.1
3,669,463	+		Sama_3095	0.77	-0.1
3,669,463	+		Sama_3095	0.77	-1.7
3,669,463	+		Sama_3095	0.77	-0.9
3,669,464	-		Sama_3095	0.77	+0.4
3,669,464	-		Sama_3095	0.77	+1.6
3,669,464	-		Sama_3095	0.77	+0.7
3,669,547	+		Sama_3095	0.86	+0.0
3,669,547	+		Sama_3095	0.86	-0.1
3,669,548	-		Sama_3095	0.86	+0.7
3,669,548	-		Sama_3095	0.86	-0.3
3,669,548	-		Sama_3095	0.86	+0.3
3,669,554	-		Sama_3095	0.87	+0.1
3,669,563	-		Sama_3095	0.88	-0.1
3,669,589	+				-1.4
3,669,590	-				-0.4
3,669,590	-				+0.6
3,669,591	+				+0.0
3,669,591	+				-0.2
3,669,591	+				-0.4
3,669,591	+				+0.8
3,669,591	+				-0.7
3,669,591	+				+0.9
3,669,591	+				-0.0
3,669,591	+				+0.2
3,669,591	+				+0.2
3,669,592	-				+0.9
3,669,592	-				-0.4
3,669,592	-				-0.3
3,669,592	-				-1.2
3,669,592	-				-0.3
3,669,592	-				-0.3
3,669,592	-				-0.7
3,669,631	+				-0.2
3,669,656	+				-0.2
3,669,657	-				-1.0