Strain Fitness in Shewanella amazonensis SB2B around Sama_1396

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,687,788	+				-0.3
1,687,810	+				-0.1
1,687,853	+				-0.8
1,687,920	+		Sama_1395	0.20	+0.1
1,687,945	+		Sama_1395	0.26	+1.2
1,687,947	+		Sama_1395	0.26	-0.7
1,687,947	+		Sama_1395	0.26	+0.0
1,687,947	+		Sama_1395	0.26	+0.2
1,687,947	+		Sama_1395	0.26	+0.2
1,688,001	+		Sama_1395	0.38	+0.4
1,688,001	+		Sama_1395	0.38	-1.2
1,688,002	-		Sama_1395	0.39	+0.3
1,688,002	-		Sama_1395	0.39	+0.2
1,688,041	-		Sama_1395	0.47	+0.3
1,688,041	-		Sama_1395	0.47	-1.8
1,688,109	+		Sama_1395	0.63	+0.0
1,688,109	+		Sama_1395	0.63	+0.0
1,688,109	+		Sama_1395	0.63	-0.4
1,688,169	+		Sama_1395	0.76	-0.4
1,688,169	+		Sama_1395	0.76	-0.4
1,688,170	-		Sama_1395	0.76	+1.0
1,688,174	-		Sama_1395	0.77	-0.3
1,688,174	-		Sama_1395	0.77	-1.0
1,688,262	+				-0.7
1,688,311	+				+0.0
1,688,360	+				+0.0
1,688,361	-				+1.5
1,688,424	-				-0.5
1,688,438	-				+0.5
1,688,444	+				+0.4
1,688,444	+				+0.3
1,688,445	-				+0.2
1,688,445	-				-1.0
1,688,446	+				-0.8
1,688,447	-				-0.0
1,688,447	-				+0.6
1,688,454	-				+0.4
1,688,454	-				-0.1
1,688,511	+				+0.5
1,688,643	-				+0.7
1,688,666	-				+0.7
1,688,814	+				+0.7
1,688,864	+				-0.8
1,688,959	+				+0.3
1,688,960	-				+0.5
1,689,024	+				+0.9
1,689,025	-				+1.0
1,689,025	-				+1.0
1,689,025	-				-0.5
1,689,062	+		Sama_1396	0.10	+0.3
1,689,062	+		Sama_1396	0.10	-0.6
1,689,062	+		Sama_1396	0.10	-0.1
1,689,062	+		Sama_1396	0.10	-1.1
1,689,063	-		Sama_1396	0.11	-0.1
1,689,063	-		Sama_1396	0.11	+0.2
1,689,073	+		Sama_1396	0.11	+0.4
1,689,073	+		Sama_1396	0.11	+0.7
1,689,073	+		Sama_1396	0.11	-0.3
1,689,074	-		Sama_1396	0.11	-0.8
1,689,074	-		Sama_1396	0.11	+1.0
1,689,074	-		Sama_1396	0.11	+0.5
1,689,074	-		Sama_1396	0.11	-0.0
1,689,074	-		Sama_1396	0.11	-0.1
1,689,111	+		Sama_1396	0.12	+0.4
1,689,111	+		Sama_1396	0.12	-0.6
1,689,111	+		Sama_1396	0.12	-0.5
1,689,111	+		Sama_1396	0.12	-0.2
1,689,113	+		Sama_1396	0.12	+1.0
1,689,113	+		Sama_1396	0.12	-0.5
1,689,114	-		Sama_1396	0.12	-0.2
1,689,114	-		Sama_1396	0.12	-1.1
1,689,114	-		Sama_1396	0.12	-0.3
1,689,114	-		Sama_1396	0.12	-0.2
1,689,286	+		Sama_1396	0.19	+0.9
1,689,293	+		Sama_1396	0.19	+0.4
1,689,308	-		Sama_1396	0.20	+0.2
1,689,328	-		Sama_1396	0.20	-1.3
1,689,328	-		Sama_1396	0.20	+0.3
1,689,328	-		Sama_1396	0.20	-0.7
1,689,390	+		Sama_1396	0.23	-0.4
1,689,391	-		Sama_1396	0.23	-1.6
1,689,431	+		Sama_1396	0.24	+0.6
1,689,431	+		Sama_1396	0.24	-0.8
1,689,432	-		Sama_1396	0.24	+0.0
1,689,432	-		Sama_1396	0.24	-0.6
1,689,432	-		Sama_1396	0.24	+0.6
1,689,435	+		Sama_1396	0.25	-0.6
1,689,435	+		Sama_1396	0.25	+0.7
1,689,435	+		Sama_1396	0.25	+0.6
1,689,435	+		Sama_1396	0.25	-0.1
1,689,435	+		Sama_1396	0.25	-0.3
1,689,435	+		Sama_1396	0.25	+2.7
1,689,436	-		Sama_1396	0.25	-1.5
1,689,436	-		Sama_1396	0.25	+0.6
1,689,471	+		Sama_1396	0.26	+0.0
1,689,471	+		Sama_1396	0.26	-0.8
1,689,471	+		Sama_1396	0.26	+0.4
1,689,471	+		Sama_1396	0.26	-0.2
1,689,471	+		Sama_1396	0.26	+0.4
1,689,471	+		Sama_1396	0.26	+0.4
1,689,472	-		Sama_1396	0.26	+0.2
1,689,483	+		Sama_1396	0.26	-0.2
1,689,484	-		Sama_1396	0.26	+0.1
1,689,484	-		Sama_1396	0.26	+0.5
1,689,489	+		Sama_1396	0.27	+0.2
1,689,490	-		Sama_1396	0.27	+0.2
1,689,490	-		Sama_1396	0.27	-1.0
1,689,490	-		Sama_1396	0.27	-1.8
1,689,490	-		Sama_1396	0.27	-0.5
1,689,490	-		Sama_1396	0.27	-0.7
1,689,519	+		Sama_1396	0.28	-0.2
1,689,519	+		Sama_1396	0.28	-1.0
1,689,519	+		Sama_1396	0.28	-0.5
1,689,520	-		Sama_1396	0.28	+0.2
1,689,567	-		Sama_1396	0.29	+0.7
1,689,576	+		Sama_1396	0.30	-0.5
1,689,577	-		Sama_1396	0.30	+1.2
1,689,732	+		Sama_1396	0.36	+0.1
1,689,757	-		Sama_1396	0.37	-0.3
1,689,757	-		Sama_1396	0.37	+0.6
1,689,757	-		Sama_1396	0.37	+0.2
1,689,814	-		Sama_1396	0.39	+2.7
1,689,845	+		Sama_1396	0.40	-0.6
1,689,846	-		Sama_1396	0.40	+0.6
1,689,954	-		Sama_1396	0.44	-0.3
1,689,991	+		Sama_1396	0.45	+0.3
1,689,991	+		Sama_1396	0.45	-1.8
1,689,991	+		Sama_1396	0.45	+0.2
1,689,991	+		Sama_1396	0.45	-0.2
1,689,992	-		Sama_1396	0.45	+0.3
1,689,993	+		Sama_1396	0.46	+0.2
1,690,006	+		Sama_1396	0.46	-1.1
1,690,052	+		Sama_1396	0.48	-0.8
1,690,052	+		Sama_1396	0.48	-0.3
1,690,052	+		Sama_1396	0.48	+0.6
1,690,053	-		Sama_1396	0.48	-0.6
1,690,114	+		Sama_1396	0.50	-2.2
1,690,115	-		Sama_1396	0.50	+0.3
1,690,118	-		Sama_1396	0.50	-0.6
1,690,371	+		Sama_1396	0.60	+0.7
1,690,522	+		Sama_1396	0.65	+0.8
1,690,566	+		Sama_1396	0.67	+1.6
1,690,566	+		Sama_1396	0.67	+0.7
1,690,566	+		Sama_1396	0.67	-0.4
1,690,566	+		Sama_1396	0.67	+0.7
1,690,567	-		Sama_1396	0.67	+1.6
1,690,567	-		Sama_1396	0.67	+0.2
1,690,567	-		Sama_1396	0.67	+0.4
1,690,568	+		Sama_1396	0.67	-0.8
1,690,568	+		Sama_1396	0.67	+1.7
1,690,568	+		Sama_1396	0.67	+0.6
1,690,569	-		Sama_1396	0.67	+1.5
1,690,569	-		Sama_1396	0.67	-0.3
1,690,623	+		Sama_1396	0.69	-0.2
1,690,624	-		Sama_1396	0.69	+0.3
1,690,624	-		Sama_1396	0.69	-0.2
1,690,637	-		Sama_1396	0.70	-1.4
1,690,652	+		Sama_1396	0.70	+0.2
1,690,652	+		Sama_1396	0.70	+1.3
1,690,652	+		Sama_1396	0.70	-0.2
1,690,652	+		Sama_1396	0.70	-0.2
1,690,652	+		Sama_1396	0.70	-1.8
1,690,652	+		Sama_1396	0.70	+0.5
1,690,673	+		Sama_1396	0.71	-0.4
1,690,831	+		Sama_1396	0.77	-1.0
1,690,855	+		Sama_1396	0.78	-0.4
1,690,855	+		Sama_1396	0.78	-2.2
1,690,855	+		Sama_1396	0.78	-0.6
1,690,856	-		Sama_1396	0.78	-0.1
1,690,856	-		Sama_1396	0.78	+0.7
1,691,058	+		Sama_1396	0.86	-0.6
1,691,058	+		Sama_1396	0.86	+0.9
1,691,059	-		Sama_1396	0.86	-2.2
1,691,112	+		Sama_1396	0.88	+0.4
1,691,113	-		Sama_1396	0.88	-0.3
1,691,113	-		Sama_1396	0.88	+0.9
1,691,115	+		Sama_1396	0.88	+0.2
1,691,115	+		Sama_1396	0.88	-0.2
1,691,115	+		Sama_1396	0.88	+0.2
1,691,115	+		Sama_1396	0.88	-0.3
1,691,115	+		Sama_1396	0.88	-0.5
1,691,116	-		Sama_1396	0.88	+1.5
1,691,134	+		Sama_1396	0.89	+0.4
1,691,247	-				+0.8
1,691,284	+				+0.2
1,691,285	-				-0.5
1,691,285	-				-0.3
1,691,301	+				+0.2
1,691,301	+				-0.4
1,691,302	-				-0.0
1,691,303	+				-0.2
1,691,303	+				+0.4
1,691,303	+				+1.2
1,691,303	+				+0.3
1,691,304	-				-0.3
1,691,304	-				+0.8
1,691,304	-				+0.3
1,691,304	-				-1.2
1,691,304	-				-0.2
1,691,304	-				-0.2
1,691,315	+				+0.2
1,691,368	+				-0.1
1,691,368	+				+0.3
1,691,425	+				+0.2
1,691,439	+				+0.2
1,691,445	+				+0.8
1,691,445	+				+1.0
1,691,445	+				-0.1
1,691,445	+				+0.6
1,691,516	+				+0.6
1,691,517	-				-1.8
1,691,517	-				+0.2
1,691,528	-				+1.2
1,691,528	-				+0.4
1,691,528	-				+0.0
1,691,528	-				-0.7
1,691,532	+				-0.4
1,691,532	+				-2.8
1,691,533	-				+0.6
1,691,533	-				+0.7
1,691,536	+				+0.1
1,691,537	-				+0.7
1,691,537	-				-0.2
1,691,537	-				-2.0
1,691,545	+				+0.5
1,691,545	+				+0.4
1,691,545	+				-0.4
1,691,545	+				+0.1
1,691,546	-				-1.3
1,691,579	-				-0.2
1,691,583	+				+0.3
1,691,583	+				-0.1
1,691,584	-				+1.1
1,691,715	+				+0.6
1,691,715	+				-0.8
1,691,715	+				+0.3
1,691,715	+				-0.3
1,691,715	+				-1.4
1,691,715	+				+0.6
1,691,716	-				+0.5
1,691,716	-				-0.5
1,691,717	+				+0.6
1,691,899	+		Sama_1397	0.12	+0.5
1,691,905	+		Sama_1397	0.12	-0.8
1,691,905	+		Sama_1397	0.12	-1.6
1,691,906	-		Sama_1397	0.12	+0.9
1,691,942	+		Sama_1397	0.14	-0.0
1,691,943	-		Sama_1397	0.14	+0.2
1,691,944	+		Sama_1397	0.14	+0.2
1,691,954	+		Sama_1397	0.14	-0.0
1,691,955	-		Sama_1397	0.14	+1.0
1,691,994	+		Sama_1397	0.15	+0.1
1,692,004	+		Sama_1397	0.16	-0.9
1,692,053	-		Sama_1397	0.17	+0.5
1,692,057	+		Sama_1397	0.17	+0.7
1,692,057	+		Sama_1397	0.17	+0.0
1,692,058	-		Sama_1397	0.18	+0.9
1,692,058	-		Sama_1397	0.18	-0.5
1,692,058	-		Sama_1397	0.18	-2.4
1,692,058	-		Sama_1397	0.18	-0.6
1,692,058	-		Sama_1397	0.18	+0.8
1,692,058	-		Sama_1397	0.18	-0.4
1,692,061	+		Sama_1397	0.18	+0.4
1,692,062	-		Sama_1397	0.18	-1.1
1,692,097	+		Sama_1397	0.19	+0.3
1,692,097	+		Sama_1397	0.19	+1.4
1,692,097	+		Sama_1397	0.19	-0.7
1,692,097	+		Sama_1397	0.19	-0.2
1,692,097	+		Sama_1397	0.19	-0.6
1,692,098	-		Sama_1397	0.19	-0.2
1,692,116	-		Sama_1397	0.19	-0.7
1,692,116	-		Sama_1397	0.19	+1.2
1,692,119	+		Sama_1397	0.20	-1.3
1,692,119	+		Sama_1397	0.20	-0.6
1,692,120	-		Sama_1397	0.20	-1.8
1,692,120	-		Sama_1397	0.20	+0.6
1,692,120	-		Sama_1397	0.20	-0.1
1,692,120	-		Sama_1397	0.20	-0.0
1,692,173	+		Sama_1397	0.21	-0.0
1,692,173	+		Sama_1397	0.21	-0.2
1,692,173	+		Sama_1397	0.21	+0.9
1,692,173	+		Sama_1397	0.21	+0.2
1,692,173	+		Sama_1397	0.21	-0.2
1,692,174	-		Sama_1397	0.21	-1.0
1,692,174	-		Sama_1397	0.21	+0.5
1,692,178	+		Sama_1397	0.21	+0.4
1,692,179	-		Sama_1397	0.22	+1.1
1,692,207	+		Sama_1397	0.22	-0.8
1,692,208	-		Sama_1397	0.22	+0.5
1,692,208	-		Sama_1397	0.22	-0.7
1,692,213	+		Sama_1397	0.23	-0.6
1,692,213	+		Sama_1397	0.23	-0.7
1,692,213	+		Sama_1397	0.23	-1.2
1,692,214	-		Sama_1397	0.23	+0.9
1,692,214	-		Sama_1397	0.23	-1.6
1,692,325	-		Sama_1397	0.26	+0.4
1,692,325	-		Sama_1397	0.26	+0.5
1,692,325	-		Sama_1397	0.26	-1.3