Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0606 and Psest_0607 are separated by 86 nucleotides
Psest_0606: Psest_0606 - Predicted hydrolase (HAD superfamily), at 657,339 to 657,971
_0606
Psest_0607: Psest_0607 - Co/Zn/Cd efflux system component, at 658,058 to 658,948
_0607
Position (kb) 657
658 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 656.398 kb on + strand at 656.398 kb on + strand at 656.398 kb on + strand at 656.399 kb on - strand at 656.399 kb on - strand at 656.412 kb on + strand at 656.412 kb on + strand at 656.412 kb on + strand at 656.412 kb on + strand at 656.413 kb on - strand at 656.427 kb on - strand at 656.478 kb on + strand at 656.478 kb on + strand at 656.478 kb on + strand at 656.479 kb on - strand at 656.479 kb on - strand at 656.479 kb on - strand at 656.479 kb on - strand at 656.571 kb on - strand at 656.574 kb on + strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.575 kb on - strand at 656.651 kb on + strand at 656.652 kb on - strand at 656.652 kb on - strand at 656.688 kb on + strand at 656.689 kb on - strand at 656.703 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.742 kb on + strand at 656.743 kb on - strand at 656.743 kb on - strand at 656.743 kb on - strand at 656.817 kb on + strand at 656.818 kb on - strand at 656.818 kb on - strand at 656.876 kb on + strand at 656.876 kb on + strand at 656.876 kb on + strand at 656.877 kb on - strand at 656.877 kb on - strand at 656.877 kb on - strand at 656.877 kb on - strand at 656.904 kb on + strand at 656.964 kb on + strand at 656.964 kb on + strand at 656.964 kb on + strand at 656.964 kb on + strand at 656.964 kb on + strand at 656.965 kb on - strand at 656.965 kb on - strand at 656.965 kb on - strand at 656.965 kb on - strand at 656.965 kb on - strand at 656.965 kb on - strand at 656.965 kb on - strand at 657.031 kb on - strand at 657.031 kb on - strand at 657.081 kb on + strand at 657.081 kb on + strand at 657.081 kb on + strand at 657.081 kb on + strand at 657.081 kb on + strand at 657.210 kb on - strand at 657.343 kb on + strand at 657.343 kb on + strand at 657.343 kb on + strand at 657.343 kb on + strand at 657.343 kb on + strand at 657.344 kb on - strand at 657.344 kb on - strand at 657.344 kb on - strand at 657.344 kb on - strand at 657.352 kb on + strand at 657.353 kb on - strand at 657.386 kb on - strand at 657.510 kb on + strand, within Psest_0606 at 657.511 kb on - strand, within Psest_0606 at 657.541 kb on + strand, within Psest_0606 at 657.541 kb on + strand, within Psest_0606 at 657.541 kb on + strand, within Psest_0606 at 657.541 kb on + strand, within Psest_0606 at 657.541 kb on + strand, within Psest_0606 at 657.542 kb on - strand, within Psest_0606 at 657.542 kb on - strand, within Psest_0606 at 657.545 kb on + strand, within Psest_0606 at 657.694 kb on + strand, within Psest_0606 at 657.715 kb on - strand, within Psest_0606 at 657.715 kb on - strand, within Psest_0606 at 657.743 kb on - strand, within Psest_0606 at 657.743 kb on - strand, within Psest_0606 at 657.762 kb on + strand, within Psest_0606 at 657.763 kb on - strand, within Psest_0606 at 657.763 kb on - strand, within Psest_0606 at 657.837 kb on - strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.877 kb on + strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.878 kb on - strand, within Psest_0606 at 657.949 kb on - strand at 657.989 kb on + strand at 657.989 kb on + strand at 657.990 kb on - strand at 658.002 kb on + strand at 658.017 kb on + strand at 658.017 kb on + strand at 658.017 kb on + strand at 658.017 kb on + strand at 658.018 kb on - strand at 658.018 kb on - strand at 658.138 kb on - strand at 658.138 kb on - strand at 658.175 kb on + strand, within Psest_0607 at 658.175 kb on + strand, within Psest_0607 at 658.215 kb on - strand, within Psest_0607 at 658.215 kb on - strand, within Psest_0607 at 658.215 kb on - strand, within Psest_0607 at 658.317 kb on - strand, within Psest_0607 at 658.343 kb on + strand, within Psest_0607 at 658.344 kb on - strand, within Psest_0607 at 658.344 kb on - strand, within Psest_0607 at 658.345 kb on + strand, within Psest_0607 at 658.345 kb on + strand, within Psest_0607 at 658.345 kb on + strand, within Psest_0607 at 658.345 kb on + strand, within Psest_0607 at 658.345 kb on + strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.346 kb on - strand, within Psest_0607 at 658.364 kb on + strand, within Psest_0607 at 658.365 kb on - strand, within Psest_0607 at 658.453 kb on - strand, within Psest_0607 at 658.453 kb on - strand, within Psest_0607 at 658.467 kb on + strand, within Psest_0607 at 658.575 kb on - strand, within Psest_0607 at 658.580 kb on + strand, within Psest_0607 at 658.581 kb on - strand, within Psest_0607 at 658.581 kb on - strand, within Psest_0607 at 658.586 kb on + strand, within Psest_0607 at 658.586 kb on + strand, within Psest_0607 at 658.586 kb on + strand, within Psest_0607 at 658.586 kb on + strand, within Psest_0607 at 658.587 kb on - strand, within Psest_0607 at 658.606 kb on + strand, within Psest_0607 at 658.606 kb on + strand, within Psest_0607 at 658.606 kb on + strand, within Psest_0607 at 658.607 kb on - strand, within Psest_0607 at 658.739 kb on + strand, within Psest_0607 at 658.740 kb on - strand, within Psest_0607 at 658.849 kb on - strand, within Psest_0607 at 658.892 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 656,398 + -2.5 656,398 + -0.1 656,398 + -1.5 656,399 - -0.5 656,399 - -0.4 656,412 + +1.0 656,412 + -1.6 656,412 + -0.5 656,412 + +0.5 656,413 - -0.4 656,427 - +2.3 656,478 + +0.3 656,478 + -3.7 656,478 + +0.8 656,479 - +0.6 656,479 - -0.5 656,479 - +0.8 656,479 - -0.1 656,571 - +1.5 656,574 + +1.3 656,575 - +1.6 656,575 - +1.0 656,575 - -0.9 656,575 - -0.2 656,575 - +1.5 656,575 - +1.6 656,575 - +0.4 656,575 - +0.9 656,575 - +0.4 656,575 - -3.0 656,575 - +0.0 656,575 - +0.5 656,651 + -3.5 656,652 - +0.7 656,652 - -0.3 656,688 + -0.5 656,689 - +0.5 656,703 + +0.9 656,742 + +2.7 656,742 + -1.9 656,742 + +0.5 656,742 + +0.4 656,742 + +1.5 656,742 + -3.6 656,742 + -2.5 656,742 + +0.3 656,743 - -3.2 656,743 - -4.0 656,743 - -0.0 656,817 + +0.8 656,818 - +1.9 656,818 - -0.4 656,876 + -0.7 656,876 + -0.0 656,876 + +0.6 656,877 - +0.7 656,877 - -0.0 656,877 - -0.1 656,877 - +1.1 656,904 + -0.2 656,964 + +0.6 656,964 + -1.2 656,964 + -1.3 656,964 + +0.4 656,964 + +1.2 656,965 - -1.6 656,965 - -2.3 656,965 - +2.0 656,965 - -0.9 656,965 - -0.1 656,965 - -3.5 656,965 - -0.2 657,031 - -2.6 657,031 - +1.7 657,081 + -4.0 657,081 + +2.2 657,081 + +0.0 657,081 + +0.6 657,081 + -2.3 657,210 - +2.2 657,343 + -0.7 657,343 + -1.3 657,343 + +0.5 657,343 + -1.4 657,343 + +0.3 657,344 - -3.3 657,344 - +1.6 657,344 - +0.4 657,344 - -0.2 657,352 + +0.8 657,353 - -1.2 657,386 - +1.0 657,510 + Psest_0606 0.27 -4.1 657,511 - Psest_0606 0.27 -0.4 657,541 + Psest_0606 0.32 -3.3 657,541 + Psest_0606 0.32 -2.0 657,541 + Psest_0606 0.32 +0.0 657,541 + Psest_0606 0.32 -1.7 657,541 + Psest_0606 0.32 -0.3 657,542 - Psest_0606 0.32 -2.3 657,542 - Psest_0606 0.32 -0.8 657,545 + Psest_0606 0.33 -0.1 657,694 + Psest_0606 0.56 -0.3 657,715 - Psest_0606 0.59 +0.1 657,715 - Psest_0606 0.59 -0.8 657,743 - Psest_0606 0.64 +1.2 657,743 - Psest_0606 0.64 -0.9 657,762 + Psest_0606 0.67 -0.0 657,763 - Psest_0606 0.67 -0.3 657,763 - Psest_0606 0.67 -0.6 657,837 - Psest_0606 0.79 +0.1 657,877 + Psest_0606 0.85 +0.1 657,877 + Psest_0606 0.85 -3.0 657,877 + Psest_0606 0.85 -3.1 657,877 + Psest_0606 0.85 -1.6 657,877 + Psest_0606 0.85 -1.3 657,877 + Psest_0606 0.85 -4.5 657,877 + Psest_0606 0.85 -0.3 657,878 - Psest_0606 0.85 +0.9 657,878 - Psest_0606 0.85 +1.0 657,878 - Psest_0606 0.85 +0.9 657,878 - Psest_0606 0.85 +0.0 657,878 - Psest_0606 0.85 -2.0 657,878 - Psest_0606 0.85 -4.8 657,878 - Psest_0606 0.85 +0.9 657,878 - Psest_0606 0.85 +0.3 657,949 - +1.3 657,989 + +1.3 657,989 + -0.1 657,990 - -1.0 658,002 + +0.1 658,017 + +0.3 658,017 + -0.4 658,017 + +0.7 658,017 + -1.1 658,018 - -3.5 658,018 - -1.4 658,138 - -0.5 658,138 - -1.8 658,175 + Psest_0607 0.13 -4.2 658,175 + Psest_0607 0.13 -1.3 658,215 - Psest_0607 0.18 +0.6 658,215 - Psest_0607 0.18 -2.4 658,215 - Psest_0607 0.18 -1.9 658,317 - Psest_0607 0.29 +0.0 658,343 + Psest_0607 0.32 -0.2 658,344 - Psest_0607 0.32 +0.7 658,344 - Psest_0607 0.32 -4.3 658,345 + Psest_0607 0.32 +0.4 658,345 + Psest_0607 0.32 +2.0 658,345 + Psest_0607 0.32 -0.3 658,345 + Psest_0607 0.32 +0.5 658,345 + Psest_0607 0.32 +1.0 658,346 - Psest_0607 0.32 +1.2 658,346 - Psest_0607 0.32 -3.7 658,346 - Psest_0607 0.32 +0.9 658,346 - Psest_0607 0.32 -2.6 658,346 - Psest_0607 0.32 -0.2 658,346 - Psest_0607 0.32 -0.8 658,346 - Psest_0607 0.32 -0.3 658,346 - Psest_0607 0.32 +0.9 658,364 + Psest_0607 0.34 -3.0 658,365 - Psest_0607 0.34 -2.0 658,453 - Psest_0607 0.44 -2.8 658,453 - Psest_0607 0.44 +0.2 658,467 + Psest_0607 0.46 -1.1 658,575 - Psest_0607 0.58 -0.5 658,580 + Psest_0607 0.59 -0.1 658,581 - Psest_0607 0.59 -3.4 658,581 - Psest_0607 0.59 +2.4 658,586 + Psest_0607 0.59 +0.6 658,586 + Psest_0607 0.59 +2.6 658,586 + Psest_0607 0.59 +2.3 658,586 + Psest_0607 0.59 +0.8 658,587 - Psest_0607 0.59 -1.4 658,606 + Psest_0607 0.62 -0.0 658,606 + Psest_0607 0.62 -4.9 658,606 + Psest_0607 0.62 -2.4 658,607 - Psest_0607 0.62 +0.7 658,739 + Psest_0607 0.76 -1.5 658,740 - Psest_0607 0.77 +1.6 658,849 - Psest_0607 0.89 -1.4 658,892 - +0.3
Or see this region's nucleotide sequence