Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0469 and Psest_0470 are separated by 80 nucleotides Psest_0470 and Psest_0471 are separated by 34 nucleotides
Psest_0469: Psest_0469 - Uncharacterized proteins, LmbE homologs, at 517,053 to 518,447
_0469
Psest_0470: Psest_0470 - rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II, at 518,528 to 519,949
_0470
Psest_0471: Psest_0471 - hypothetical protein, at 519,984 to 520,871
_0471
Position (kb) 518
519
520 Strain fitness (log2 ratio) -2
-1
0
1
2 at 518.445 kb on + strand at 518.445 kb on + strand at 518.445 kb on + strand at 518.446 kb on - strand at 518.446 kb on - strand at 518.446 kb on - strand at 518.489 kb on + strand at 518.489 kb on + strand at 518.489 kb on + strand at 518.490 kb on - strand at 518.490 kb on - strand at 518.492 kb on + strand at 518.492 kb on + strand at 520.100 kb on + strand, within Psest_0471 at 520.128 kb on + strand, within Psest_0471 at 520.129 kb on - strand, within Psest_0471 at 520.129 kb on - strand, within Psest_0471 at 520.129 kb on - strand, within Psest_0471 at 520.178 kb on - strand, within Psest_0471 at 520.178 kb on - strand, within Psest_0471 at 520.178 kb on - strand, within Psest_0471 at 520.178 kb on - strand, within Psest_0471 at 520.284 kb on - strand, within Psest_0471 at 520.294 kb on + strand, within Psest_0471 at 520.295 kb on - strand, within Psest_0471 at 520.330 kb on + strand, within Psest_0471 at 520.330 kb on + strand, within Psest_0471 at 520.331 kb on - strand, within Psest_0471 at 520.331 kb on - strand, within Psest_0471 at 520.572 kb on - strand, within Psest_0471 at 520.573 kb on + strand, within Psest_0471 at 520.573 kb on + strand, within Psest_0471 at 520.574 kb on - strand, within Psest_0471 at 520.574 kb on - strand, within Psest_0471 at 520.786 kb on + strand at 520.787 kb on - strand at 520.787 kb on - strand at 520.816 kb on + strand at 520.816 kb on + strand at 520.817 kb on - strand at 520.817 kb on - strand at 520.817 kb on - strand at 520.854 kb on + strand at 520.855 kb on - strand at 520.866 kb on - strand at 520.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 518,445 + +0.3 518,445 + +1.3 518,445 + -0.7 518,446 - +0.3 518,446 - +0.4 518,446 - -2.7 518,489 + -0.9 518,489 + +1.3 518,489 + -2.7 518,490 - +1.0 518,490 - +1.7 518,492 + +1.7 518,492 + +0.3 520,100 + Psest_0471 0.13 +0.0 520,128 + Psest_0471 0.16 +2.0 520,129 - Psest_0471 0.16 +1.9 520,129 - Psest_0471 0.16 +0.3 520,129 - Psest_0471 0.16 -0.7 520,178 - Psest_0471 0.22 -0.6 520,178 - Psest_0471 0.22 +0.3 520,178 - Psest_0471 0.22 +2.1 520,178 - Psest_0471 0.22 +0.3 520,284 - Psest_0471 0.34 +2.0 520,294 + Psest_0471 0.35 +1.3 520,295 - Psest_0471 0.35 +0.3 520,330 + Psest_0471 0.39 +0.8 520,330 + Psest_0471 0.39 -0.2 520,331 - Psest_0471 0.39 -0.5 520,331 - Psest_0471 0.39 +0.6 520,572 - Psest_0471 0.66 +0.3 520,573 + Psest_0471 0.66 +0.8 520,573 + Psest_0471 0.66 +1.1 520,574 - Psest_0471 0.66 +0.3 520,574 - Psest_0471 0.66 -0.2 520,786 + +1.3 520,787 - -0.3 520,787 - +1.3 520,816 + -0.0 520,816 + +1.3 520,817 - -1.9 520,817 - +2.4 520,817 - -1.9 520,854 + +0.3 520,855 - +1.3 520,866 - -0.1 520,866 - +0.3
Or see this region's nucleotide sequence