Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0046

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
47,727	-				-0.6
47,758	+				-1.9
47,759	-				-1.9
47,792	+				-0.0
47,792	+				+0.4
47,916	+				-0.1
47,916	+				+0.7
47,917	-				-0.3
47,917	-				+0.9
47,917	-				+1.3
47,917	-				-0.7
48,030	-				-0.3
48,046	-		Psest_0045	0.13	-1.3
48,046	-		Psest_0045	0.13	-0.7
48,046	-		Psest_0045	0.13	+0.1
48,051	-		Psest_0045	0.14	+0.3
48,056	+		Psest_0045	0.15	-0.0
48,078	-		Psest_0045	0.21	-0.5
48,112	+		Psest_0045	0.30	+0.1
48,113	-		Psest_0045	0.30	+0.3
48,114	+		Psest_0045	0.31	+0.6
48,115	-		Psest_0045	0.31	-0.3
48,116	+		Psest_0045	0.31	+1.3
48,207	-		Psest_0045	0.55	+0.3
48,281	-		Psest_0045	0.75	+2.5
48,295	+		Psest_0045	0.79	+1.8
48,335	-		Psest_0045	0.89	-0.3
48,341	-				+2.0
48,341	-				+2.3
48,354	-				+1.2
48,451	-				+0.3
48,473	-				-1.0
48,480	+				+1.7
48,480	+				+0.4
48,481	-				+1.3
48,494	+				+2.8
48,494	+				+2.3
48,494	+				+1.3
48,494	+				+0.6
48,494	+				+1.3
48,494	+				+0.3
48,495	-				+0.3
48,495	-				+0.3
48,495	-				-0.7
48,495	-				+0.4
48,495	-				+1.9
48,495	-				-1.5
48,495	-				-0.7
48,495	-				+1.3
48,500	+				+0.1
48,500	+				+0.3
48,500	+				+0.3
48,501	-				-0.3
48,512	-				-1.3
48,533	-				+1.3
48,582	-				-1.7
48,735	+		Psest_0046	0.39	-0.3
48,736	-		Psest_0046	0.39	-0.3
48,736	-		Psest_0046	0.39	+3.3
48,795	-		Psest_0046	0.52	+1.7
48,864	+		Psest_0046	0.67	-0.3
48,865	-		Psest_0046	0.68	+0.7
48,894	+		Psest_0046	0.74	-1.3
48,894	+		Psest_0046	0.74	-1.7
48,894	+		Psest_0046	0.74	+1.9
48,894	+		Psest_0046	0.74	+2.1
48,894	+		Psest_0046	0.74	-0.9
48,894	+		Psest_0046	0.74	-1.3
48,894	+		Psest_0046	0.74	+1.1
48,895	-		Psest_0046	0.74	+0.5
48,895	-		Psest_0046	0.74	-0.3
48,895	-		Psest_0046	0.74	+0.6
48,895	-		Psest_0046	0.74	+1.7
48,895	-		Psest_0046	0.74	+1.3
48,895	-		Psest_0046	0.74	+0.9
48,895	-		Psest_0046	0.74	+1.2
48,915	+		Psest_0046	0.78	-0.5
48,960	+		Psest_0046	0.88	+0.1
48,960	+		Psest_0046	0.88	-1.0
48,960	+		Psest_0046	0.88	+2.9
48,961	-		Psest_0046	0.88	-0.5
48,971	+				+0.7
48,971	+				-0.9
48,971	+				+1.3
48,971	+				+0.3
48,971	+				-0.3
48,971	+				+0.3
48,971	+				-0.7
48,972	-				-0.7
48,972	-				-1.7
48,972	-				+0.3
48,981	+				+1.6
48,982	-				+0.5
48,982	-				+0.4
48,982	-				-0.4
49,080	+				-0.6
49,080	+				+0.7
49,229	-				-1.9
49,229	-				-0.1
49,246	+				+0.3
49,247	-				+1.9
49,247	-				+1.2
49,285	+				-0.0
49,286	-				+0.7
49,293	+				+0.6
49,293	+				+1.3
49,294	-				-0.3
49,294	-				-1.1
49,411	-				-0.3
49,458	+		Psest_0047	0.13	-0.3
49,459	-		Psest_0047	0.13	-0.4
49,459	-		Psest_0047	0.13	-0.1
49,459	-		Psest_0047	0.13	+0.8
49,893	+		Psest_0047	0.49	-1.3
49,958	+		Psest_0047	0.54	-0.7
49,958	+		Psest_0047	0.54	+1.0