Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4393

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
10,963	-				-0.1
10,965	+				-0.6
10,993	+				-1.3
11,012	+				-0.2
11,021	+				-3.5
11,021	+				-0.7
11,021	+				+0.7
11,021	+				+0.5
11,021	+				+0.1
11,021	+				+2.9
11,021	+				-0.7
11,021	+				+1.4
11,021	+				+1.9
11,021	+				-1.8
11,021	+				-1.4
11,021	+				-2.1
11,021	+				-1.5
11,021	+				+0.7
11,021	+				-0.6
11,021	+				-1.3
11,021	+				+1.5
11,022	-				-0.7
11,022	-				+0.6
11,022	-				-4.1
11,022	-				-2.8
11,022	-				-0.0
11,022	-				-1.1
11,022	-				-1.0
11,022	-				-0.3
11,022	-				-0.8
11,022	-				-2.1
11,043	+				-2.5
11,044	-				-2.1
11,055	-				-0.0
11,144	-		Psest_4391	0.24	+1.0
11,162	+		Psest_4391	0.27	-1.2
11,162	+		Psest_4391	0.27	-2.3
11,163	-		Psest_4391	0.27	+0.9
11,163	-		Psest_4391	0.27	-0.4
11,163	-		Psest_4391	0.27	-0.3
11,163	-		Psest_4391	0.27	+2.8
11,224	+		Psest_4391	0.38	-2.7
11,224	+		Psest_4391	0.38	+0.8
11,226	+		Psest_4391	0.38	+0.6
11,226	+		Psest_4391	0.38	-0.1
11,226	+		Psest_4391	0.38	+1.3
11,226	+		Psest_4391	0.38	+0.7
11,226	+		Psest_4391	0.38	+2.8
11,226	+		Psest_4391	0.38	-1.7
11,226	+		Psest_4391	0.38	+0.9
11,226	+		Psest_4391	0.38	-2.0
11,226	+		Psest_4391	0.38	-2.0
11,226	+		Psest_4391	0.38	+0.1
11,226	+		Psest_4391	0.38	-1.0
11,226	+		Psest_4391	0.38	+0.1
11,226	+		Psest_4391	0.38	+1.8
11,226	+		Psest_4391	0.38	+1.6
11,226	+		Psest_4391	0.38	+0.5
11,226	+		Psest_4391	0.38	-0.0
11,226	+		Psest_4391	0.38	+1.5
11,226	+		Psest_4391	0.38	+0.6
11,226	+		Psest_4391	0.38	+0.5
11,226	+		Psest_4391	0.38	-1.5
11,226	+		Psest_4391	0.38	-0.7
11,226	+		Psest_4391	0.38	+1.7
11,226	+		Psest_4391	0.38	-1.5
11,226	+		Psest_4391	0.38	+2.5
11,226	+		Psest_4391	0.38	+1.4
11,227	-		Psest_4391	0.38	-0.3
11,227	-		Psest_4391	0.38	+2.4
11,227	-		Psest_4391	0.38	+2.0
11,227	-		Psest_4391	0.38	+2.9
11,227	-		Psest_4391	0.38	+2.9
11,227	-				-0.3
11,227	-		Psest_4391	0.38	+0.9
11,227	-		Psest_4391	0.38	-0.0
11,227	-		Psest_4391	0.38	-0.2
11,227	-		Psest_4391	0.38	+0.3
11,227	-		Psest_4391	0.38	-1.8
11,227	-		Psest_4391	0.38	-0.5
11,227	-		Psest_4391	0.38	-1.1
11,227	-		Psest_4391	0.38	+2.1
11,227	-		Psest_4391	0.38	-0.9
11,230	+		Psest_4391	0.39	-0.7
11,230	+		Psest_4391	0.39	-2.3
11,230	+		Psest_4391	0.39	-0.9
11,230	+		Psest_4391	0.39	-1.7
11,230	+		Psest_4391	0.39	+1.0
11,230	+		Psest_4391	0.39	-0.2
11,230	+		Psest_4391	0.39	-1.8
11,230	+		Psest_4391	0.39	-0.3
11,230	+		Psest_4391	0.39	-1.3
11,230	+		Psest_4391	0.39	-1.9
11,230	+		Psest_4391	0.39	-0.0
11,230	+		Psest_4391	0.39	-2.3
11,230	+		Psest_4391	0.39	-0.9
11,230	+		Psest_4391	0.39	+1.1
11,230	+		Psest_4391	0.39	-2.0
11,230	+		Psest_4391	0.39	-0.3
11,230	+		Psest_4391	0.39	+0.3
11,230	+		Psest_4391	0.39	+1.1
11,230	+		Psest_4391	0.39	-0.7
11,230	+		Psest_4391	0.39	-0.3
11,230	+		Psest_4391	0.39	-1.3
11,230	+		Psest_4391	0.39	+0.7
11,230	+		Psest_4391	0.39	-1.6
11,230	+		Psest_4391	0.39	-0.4
11,230	+		Psest_4391	0.39	+1.1
11,230	+		Psest_4391	0.39	-1.3
11,230	+		Psest_4391	0.39	-1.5
11,230	+		Psest_4391	0.39	-0.5
11,230	+		Psest_4391	0.39	+2.1
11,230	+		Psest_4391	0.39	+0.3
11,230	+		Psest_4391	0.39	-2.3
11,230	+		Psest_4391	0.39	-0.4
11,230	+		Psest_4391	0.39	+2.6
11,230	+		Psest_4391	0.39	-0.5
11,230	+		Psest_4391	0.39	-1.9
11,230	+		Psest_4391	0.39	-0.6
11,231	-		Psest_4391	0.39	-0.3
11,231	-		Psest_4391	0.39	-2.4
11,231	-		Psest_4391	0.39	+0.5
11,231	-		Psest_4391	0.39	-2.2
11,231	-		Psest_4391	0.39	-1.7
11,231	-		Psest_4391	0.39	-0.3
11,231	-		Psest_4391	0.39	-0.9
11,231	-		Psest_4391	0.39	-1.0
11,231	-		Psest_4391	0.39	+0.7
11,231	-		Psest_4391	0.39	-0.3
11,231	-		Psest_4391	0.39	+1.9
11,231	-		Psest_4391	0.39	+0.8
11,231	-		Psest_4391	0.39	-0.3
11,231	-		Psest_4391	0.39	-1.4
11,231	-		Psest_4391	0.39	-1.5
11,231	-		Psest_4391	0.39	+1.5
11,231	-		Psest_4391	0.39	+1.9
11,231	-		Psest_4391	0.39	+2.0
11,231	-		Psest_4391	0.39	-0.2
11,231	-		Psest_4391	0.39	-0.3
11,231	-		Psest_4391	0.39	-1.1
11,231	-		Psest_4391	0.39	-0.0
11,231	-		Psest_4391	0.39	-0.5
11,231	-		Psest_4391	0.39	-3.2
11,231	-		Psest_4391	0.39	+1.0
11,231	-		Psest_4391	0.39	+0.3
11,231	-		Psest_4391	0.39	-0.0
11,231	-		Psest_4391	0.39	-2.0
11,231	-		Psest_4391	0.39	-0.4
11,258	+		Psest_4391	0.43	+1.2
11,259	-		Psest_4391	0.43	-1.9
11,421	+		Psest_4391	0.71	+0.8
11,421	+		Psest_4391	0.71	+1.4
11,421	+		Psest_4391	0.71	+0.1
11,422	-		Psest_4391	0.71	+1.3
11,422	-		Psest_4391	0.71	-1.6
11,462	-		Psest_4391	0.78	+0.7
11,499	+		Psest_4391	0.84	-0.9
11,500	-		Psest_4391	0.84	-1.6
11,500	-		Psest_4391	0.84	-1.4
11,500	-		Psest_4391	0.84	-0.5
11,506	+		Psest_4391	0.85	-1.4
11,506	+		Psest_4391	0.85	+3.0
11,506	+		Psest_4391	0.85	-2.3
11,507	-		Psest_4391	0.85	-3.3
11,577	+				-1.9
11,822	-				-2.7
11,835	+				-2.2
11,835	+				-1.0
11,836	-				-2.3
11,836	-				+0.4
11,844	-				-1.4
11,853	+				+0.6
11,854	-				+3.0
11,854	-				+1.2
11,854	-				-3.3
11,854	-				-1.7
11,854	-				-1.4
11,854	-				-2.0
11,854	-				-2.9
11,854	-				-2.6
11,877	+				+0.3
11,877	+				+2.3
11,877	+				-2.5
11,877	+				+3.1
11,877	+				-0.0
11,878	-				-0.5
11,878	-				-2.4
11,880	+				-1.9
11,880	+				-1.7
11,881	-				-2.8
11,881	-				-0.8
12,310	-		Psest_4393	0.50	-0.0
12,310	-		Psest_4393	0.50	-2.4
12,403	-		Psest_4393	0.60	-1.0
12,403	-		Psest_4393	0.60	-1.4
12,406	+		Psest_4393	0.61	-1.3
12,406	+		Psest_4393	0.61	-3.0
12,406	+		Psest_4393	0.61	+1.1
12,406	+		Psest_4393	0.61	+0.7
12,406	+		Psest_4393	0.61	-1.6
12,406	+		Psest_4393	0.61	-1.3
12,406	+		Psest_4393	0.61	-1.5
12,406	+		Psest_4393	0.61	-1.2
12,407	-		Psest_4393	0.61	-0.5
12,407	-		Psest_4393	0.61	-0.4
12,407	-		Psest_4393	0.61	-2.5
12,407	-		Psest_4393	0.61	-0.5
12,407	-		Psest_4393	0.61	-1.3
12,407	-		Psest_4393	0.61	+0.9
12,407	-		Psest_4393	0.61	-1.7
12,407	-		Psest_4393	0.61	-0.5
12,407	-		Psest_4393	0.61	-1.0
12,407	-		Psest_4393	0.61	-0.9
12,407	-		Psest_4393	0.61	-1.4
12,407	-		Psest_4393	0.61	-1.4
12,407	-		Psest_4393	0.61	-1.6
12,407	-		Psest_4393	0.61	-2.6
12,407	-		Psest_4393	0.61	-2.1
12,407	-		Psest_4393	0.61	-0.9
12,407	-		Psest_4393	0.61	-1.4
12,407	-		Psest_4393	0.61	+1.0
12,407	-		Psest_4393	0.61	-1.5
12,407	-		Psest_4393	0.61	-1.4
12,639	+		Psest_4393	0.87	+0.3
12,658	+		Psest_4393	0.89	-1.9
12,658	+		Psest_4393	0.89	-0.5
12,658	+		Psest_4393	0.89	+0.5
12,743	-				+0.3
12,746	-				-3.0
12,746	-				-1.5
12,746	-				+0.6
12,746	-				+1.7
12,746	-				-2.8
12,746	-				-0.9
12,746	-				-2.6
12,746	-				-1.5
12,746	-				-1.9
12,746	-				-2.8
12,746	-				+1.4
12,746	-				-0.4
12,746	-				-1.4
12,746	-				-1.6
12,746	-				-0.6
12,746	-				-1.4
12,746	-				+0.5
12,746	-				-2.9
12,746	-				-3.7
12,746	-				-0.6
12,746	-				-2.9
12,746	-				-0.4
12,746	-				-1.0
12,746	-				-2.5
12,746	-				-3.0
12,746	-				-2.7
12,746	-				-1.3