Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_78p00300

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_78p00290 and PGA1_78p00300 are separated by 18 nucleotidesPGA1_78p00300 and PGA1_78p00310 are separated by 100 nucleotides PGA1_78p00290: PGA1_78p00290 - aminomethyltransferase GcvT, at 35,146 to 36,243 _78p00290 PGA1_78p00300: PGA1_78p00300 - glycine cleavage system protein GcvH, at 36,262 to 36,627 _78p00300 PGA1_78p00310: PGA1_78p00310 - glycine dehydrogenase, at 36,728 to 39,583 _78p00310 Position (kb) 36 37Strain fitness (log2 ratio) -1 0 1at 36.613 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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36,613 - +1.3

Or see this region's nucleotide sequence