Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3660

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,820,365	+				+2.9
3,820,365	+				-0.7
3,820,365	+				-0.3
3,820,365	+				-0.3
3,820,366	-				+0.3
3,820,366	-				-1.5
3,820,366	-				+0.7
3,820,366	-				-1.8
3,820,366	-				+1.3
3,820,366	-				-2.4
3,820,366	-				+0.2
3,820,366	-				+0.1
3,820,366	-				+1.3
3,820,464	+				-1.0
3,820,464	+				-0.3
3,820,464	+				+1.3
3,820,464	+				+1.9
3,820,464	+				-0.3
3,820,465	-				+0.3
3,820,465	-				-0.5
3,820,465	-				+0.5
3,820,465	-				+0.2
3,820,465	-				-0.7
3,820,493	+				+1.3
3,820,597	+				+1.3
3,820,742	-		Psest_3659	0.27	+1.3
3,820,832	-		Psest_3659	0.41	+1.0
3,820,832	-		Psest_3659	0.41	+1.3
3,821,040	-		Psest_3659	0.74	+2.3
3,821,040	-		Psest_3659	0.74	-0.7
3,821,040	-		Psest_3659	0.74	+0.3
3,821,040	-		Psest_3659	0.74	+1.3
3,821,420	+				+1.3
3,821,420	+				-0.3
3,821,420	+				+1.3
3,821,420	+				+1.3
3,821,420	+				+1.9
3,821,420	+				+1.3
3,821,420	+				-0.3
3,821,420	+				+0.3
3,821,421	-				+0.7
3,821,801	+		Psest_3660	0.25	-0.7
3,821,801	+		Psest_3660	0.25	+0.8
3,822,163	-		Psest_3660	0.40	-0.7
3,822,196	-		Psest_3660	0.41	+1.3
3,822,196	-		Psest_3660	0.41	+1.9
3,822,341	+		Psest_3660	0.47	+0.3
3,822,341	+		Psest_3660	0.47	-1.0
3,822,341	+		Psest_3660	0.47	+0.3
3,822,341	+		Psest_3660	0.47	-1.7
3,822,342	-		Psest_3660	0.47	+0.3
3,822,347	+		Psest_3660	0.48	-1.3
3,822,347	+		Psest_3660	0.48	-1.0
3,822,347	+		Psest_3660	0.48	-1.0
3,822,348	-		Psest_3660	0.48	-0.3
3,822,348	-		Psest_3660	0.48	-0.6
3,822,348	-		Psest_3660	0.48	-0.3
3,822,348	-		Psest_3660	0.48	+0.6
3,822,351	+		Psest_3660	0.48	-0.3
3,822,352	-		Psest_3660	0.48	-0.3
3,822,437	+		Psest_3660	0.51	+0.3
3,822,438	-		Psest_3660	0.51	+1.3
3,822,811	-		Psest_3660	0.67	+0.3
3,823,050	+		Psest_3660	0.77	-0.3
3,823,050	+		Psest_3660	0.77	-0.3
3,823,118	-		Psest_3660	0.79	-0.6
3,823,125	+		Psest_3660	0.80	+0.6
3,823,125	+		Psest_3660	0.80	+0.2
3,823,194	+		Psest_3660	0.83	-1.0
3,823,194	+		Psest_3660	0.83	+2.6
3,823,194	+		Psest_3660	0.83	-0.3
3,823,194	+		Psest_3660	0.83	-0.1
3,823,194	+		Psest_3660	0.83	+0.1
3,823,195	-		Psest_3660	0.83	-0.3
3,823,269	+		Psest_3660	0.86	-1.0
3,823,461	+				+0.0
3,823,461	+				-0.3
3,823,471	-				-0.3
3,823,615	+				+1.6
3,823,615	+				+1.3
3,823,615	+				-1.0
3,823,615	+				+2.3
3,823,615	+				+2.3
3,823,615	+				+1.3
3,823,615	+				+0.7
3,823,615	+				-1.8
3,823,615	+				+1.3
3,823,615	+				+0.3
3,823,615	+				-0.3
3,823,615	+				-1.3
3,823,615	+				-0.9
3,823,615	+				+0.3
3,823,616	-				+1.3
3,823,616	-				+0.7
3,823,616	-				-0.1
3,823,616	-				-0.5
3,823,616	-				+2.3
3,823,616	-				+0.3
3,823,616	-				+1.8
3,823,616	-				+0.3
3,823,616	-				+2.9
3,823,616	-				+0.0
3,823,616	-				-0.3
3,823,617	+				-0.7
3,823,617	+				+2.9
3,823,617	+				+0.7
3,823,617	+				+1.3
3,823,617	+				+0.3
3,823,617	+				+0.3
3,823,618	-				+0.0
3,823,618	-				+1.7
3,823,618	-				-1.0
3,823,618	-				-0.3
3,823,618	-				+1.3
3,823,618	-				+0.1
3,823,654	+				+0.3
3,823,654	+				-0.3
3,823,654	+				+2.9
3,823,654	+				+0.6
3,823,654	+				+0.3
3,823,654	+				+1.8
3,823,655	-				+2.0
3,823,655	-				+1.3
3,823,772	+				+3.6
3,823,772	+				-1.3
3,823,772	+				+1.2
3,823,773	-				+0.1
3,824,156	-		Psest_3661	0.44	+1.3
3,824,220	+		Psest_3661	0.50	+1.3
3,824,220	+		Psest_3661	0.50	+1.0
3,824,289	+		Psest_3661	0.57	+1.3
3,824,289	+		Psest_3661	0.57	-0.2
3,824,289	+		Psest_3661	0.57	-0.4
3,824,289	+		Psest_3661	0.57	+0.1
3,824,290	-		Psest_3661	0.57	+2.7
3,824,417	+		Psest_3661	0.70	+1.9
3,824,473	+		Psest_3661	0.75	-0.3
3,824,473	+		Psest_3661	0.75	+1.9
3,824,474	-		Psest_3661	0.75	+1.3
3,824,474	-		Psest_3661	0.75	+0.6
3,824,507	+		Psest_3661	0.78	-0.2
3,824,507	+		Psest_3661	0.78	+0.7
3,824,508	-		Psest_3661	0.79	-1.5
3,824,508	-		Psest_3661	0.79	-1.7
3,824,508	-		Psest_3661	0.79	-1.0
3,824,508	-		Psest_3661	0.79	-1.0
3,824,532	+		Psest_3661	0.81	+0.7
3,824,532	+		Psest_3661	0.81	-0.9
3,824,533	-		Psest_3661	0.81	-1.8
3,824,533	-		Psest_3661	0.81	+1.3
3,824,543	+		Psest_3661	0.82	+1.6
3,824,543	+		Psest_3661	0.82	-0.8
3,824,543	+		Psest_3661	0.82	+0.0
3,824,543	+		Psest_3661	0.82	-0.0
3,824,543	+		Psest_3661	0.82	+0.3
3,824,543	+		Psest_3661	0.82	-0.3
3,824,543	+		Psest_3661	0.82	+0.5
3,824,543	+		Psest_3661	0.82	+0.7
3,824,543	+		Psest_3661	0.82	+2.3
3,824,543	+		Psest_3661	0.82	-0.3
3,824,543	+		Psest_3661	0.82	+0.8
3,824,543	+		Psest_3661	0.82	+1.3
3,824,543	+		Psest_3661	0.82	-0.5
3,824,543	+		Psest_3661	0.82	+0.0
3,824,543	+		Psest_3661	0.82	+1.5
3,824,543	+		Psest_3661	0.82	+0.5
3,824,543	+		Psest_3661	0.82	-0.7
3,824,543	+		Psest_3661	0.82	+1.3
3,824,544	-		Psest_3661	0.82	+0.8
3,824,544	-		Psest_3661	0.82	+1.3
3,824,544	-		Psest_3661	0.82	-0.7
3,824,544	-		Psest_3661	0.82	-1.3
3,824,544	-		Psest_3661	0.82	+0.3
3,824,544	-		Psest_3661	0.82	+0.7
3,824,544	-		Psest_3661	0.82	+0.0
3,824,544	-		Psest_3661	0.82	+2.5
3,824,544	-		Psest_3661	0.82	-0.5
3,824,544	-		Psest_3661	0.82	-0.7
3,824,544	-		Psest_3661	0.82	+0.3
3,824,545	+		Psest_3661	0.82	-0.3
3,824,545	+		Psest_3661	0.82	-1.0
3,824,546	-		Psest_3661	0.82	+3.6