Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3635 and Psest_3636 are separated by 170 nucleotides Psest_3636 and Psest_3637 are separated by 2 nucleotides
Psest_3635: Psest_3635 - tyrosyl-tRNA synthetase, at 3,796,389 to 3,797,594
_3635
Psest_3636: Psest_3636 - Membrane proteins related to metalloendopeptidases, at 3,797,765 to 3,799,174
_3636
Psest_3637: Psest_3637 - Predicted molecular chaperone distantly related to HSP70-fold metalloproteases, at 3,799,177 to 3,800,268
_3637
Position (kb)
3797
3798
3799
3800 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 3797.605 kb on - strand at 3797.605 kb on - strand at 3797.607 kb on - strand at 3797.607 kb on - strand at 3797.607 kb on - strand at 3797.613 kb on - strand at 3797.632 kb on - strand at 3797.632 kb on - strand at 3797.632 kb on - strand at 3797.715 kb on + strand at 3797.730 kb on + strand at 3799.186 kb on + strand at 3799.248 kb on + strand at 3799.378 kb on - strand, within Psest_3637 at 3799.406 kb on + strand, within Psest_3637 at 3799.833 kb on - strand, within Psest_3637 at 3799.943 kb on + strand, within Psest_3637 at 3799.943 kb on + strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3800.042 kb on + strand, within Psest_3637 at 3800.043 kb on - strand, within Psest_3637 at 3800.043 kb on - strand, within Psest_3637 at 3800.062 kb on - strand, within Psest_3637 at 3800.112 kb on - strand, within Psest_3637 at 3800.151 kb on - strand, within Psest_3637
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 3,797,605 - -0.6 3,797,605 - -0.4 3,797,607 - -3.3 3,797,607 - +0.5 3,797,607 - -3.0 3,797,613 - +0.8 3,797,632 - -5.1 3,797,632 - -0.4 3,797,632 - -2.4 3,797,715 + +0.8 3,797,730 + -1.0 3,799,186 + +1.4 3,799,248 + +1.5 3,799,378 - Psest_3637 0.18 -2.0 3,799,406 + Psest_3637 0.21 +4.0 3,799,833 - Psest_3637 0.60 +0.2 3,799,943 + Psest_3637 0.70 -0.7 3,799,943 + Psest_3637 0.70 +4.6 3,799,944 - Psest_3637 0.70 -2.0 3,799,944 - Psest_3637 0.70 -1.4 3,799,944 - Psest_3637 0.70 -2.2 3,799,944 - Psest_3637 0.70 +1.3 3,799,944 - Psest_3637 0.70 -1.8 3,800,042 + Psest_3637 0.79 +1.6 3,800,043 - Psest_3637 0.79 +3.0 3,800,043 - Psest_3637 0.79 -2.9 3,800,062 - Psest_3637 0.81 +1.1 3,800,112 - Psest_3637 0.86 +0.7 3,800,151 - Psest_3637 0.89 +0.2
Or see this region's nucleotide sequence