Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3389

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,559,037	+				+0.2
3,559,037	+				-0.0
3,559,037	+				+0.7
3,559,037	+				-0.1
3,559,083	-				-0.3
3,559,083	-				-0.4
3,559,139	+				+1.2
3,559,140	-				+0.5
3,559,140	-				-3.2
3,559,146	+				-2.0
3,559,147	-				+1.9
3,559,175	+		Psest_3389	0.18	-1.6
3,559,175	+		Psest_3389	0.18	-1.4
3,559,186	-		Psest_3389	0.23	-3.2
3,559,245	+		Psest_3389	0.49	-0.3
3,559,282	+		Psest_3389	0.65	-3.0
3,559,337	+		Psest_3389	0.89	+0.0
3,559,337	+		Psest_3389	0.89	-2.0
3,559,338	-				-0.5
3,559,338	-				-0.7
3,559,338	-				+0.9
3,559,359	-				-1.8
3,559,416	+				+0.5
3,559,416	+				-3.5
3,559,416	+				-1.3
3,559,416	+				+0.6
3,559,416	+				-0.9
3,559,416	+				-0.4
3,559,417	-				-0.6
3,559,417	-				-0.7
3,559,533	-		Psest_3390	0.12	-2.0
3,559,533	-		Psest_3390	0.12	-0.8
3,559,533	-		Psest_3390	0.12	+0.7
3,559,553	+		Psest_3390	0.16	-0.1
3,559,553	+		Psest_3390	0.16	-0.7
3,559,553	+		Psest_3390	0.16	+1.0
3,559,554	-		Psest_3390	0.16	-2.6
3,559,702	-		Psest_3390	0.40	-1.1
3,559,702	-		Psest_3390	0.40	+0.4
3,559,705	+		Psest_3390	0.40	+0.4
3,559,705	+		Psest_3390	0.40	-0.1
3,559,705	+		Psest_3390	0.40	+0.1
3,559,705	+		Psest_3390	0.40	-0.2
3,559,705	+		Psest_3390	0.40	+1.4
3,559,705	+		Psest_3390	0.40	-0.5
3,559,705	+		Psest_3390	0.40	+0.5
3,559,705	+		Psest_3390	0.40	+2.0
3,559,705	+		Psest_3390	0.40	-0.8
3,559,705	+		Psest_3390	0.40	+0.1
3,559,705	+		Psest_3390	0.40	-0.7
3,559,705	+		Psest_3390	0.40	+0.2
3,559,705	+		Psest_3390	0.40	-2.1
3,559,705	+		Psest_3390	0.40	+0.3
3,559,706	-		Psest_3390	0.40	-1.4
3,559,706	-		Psest_3390	0.40	+0.5
3,559,706	-		Psest_3390	0.40	+0.2
3,559,706	-		Psest_3390	0.40	+0.6
3,559,706	-		Psest_3390	0.40	+0.4
3,559,706	-		Psest_3390	0.40	+0.7
3,559,706	-		Psest_3390	0.40	-2.7
3,559,706	-		Psest_3390	0.40	+1.1
3,559,757	+		Psest_3390	0.49	-0.5
3,559,758	-		Psest_3390	0.49	+1.5
3,560,030	+				-2.2
3,560,030	+				-3.0
3,560,030	+				-0.5
3,560,030	+				-1.6
3,560,288	+		Psest_3391	0.77	-1.9
3,560,288	+		Psest_3391	0.77	-2.4
3,560,289	-		Psest_3391	0.78	-2.0
3,560,289	-		Psest_3391	0.78	-4.1