Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3366 and Psest_3367 are separated by 122 nucleotides Psest_3367 and Psest_3368 are separated by 148 nucleotides
Psest_3366: Psest_3366 - Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) , at 3,534,786 to 3,536,699
_3366
Psest_3367: Psest_3367 - translation initation factor SUI1, putative, prokaryotic, at 3,536,822 to 3,537,193
_3367
Psest_3368: Psest_3368 - glycine oxidase ThiO, at 3,537,342 to 3,538,451
_3368
Position (kb)
3536
3537
3538 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3535.834 kb on + strand, within Psest_3366 at 3535.834 kb on + strand, within Psest_3366 at 3535.834 kb on + strand, within Psest_3366 at 3535.835 kb on - strand, within Psest_3366 at 3535.835 kb on - strand, within Psest_3366 at 3535.835 kb on - strand, within Psest_3366 at 3535.871 kb on - strand, within Psest_3366 at 3535.871 kb on - strand, within Psest_3366 at 3535.874 kb on - strand, within Psest_3366 at 3535.903 kb on + strand, within Psest_3366 at 3535.904 kb on - strand, within Psest_3366 at 3536.172 kb on + strand, within Psest_3366 at 3536.172 kb on + strand, within Psest_3366 at 3536.173 kb on - strand, within Psest_3366 at 3536.173 kb on - strand, within Psest_3366 at 3536.173 kb on - strand, within Psest_3366 at 3536.173 kb on - strand, within Psest_3366 at 3536.173 kb on - strand, within Psest_3366 at 3536.392 kb on + strand, within Psest_3366 at 3536.392 kb on + strand, within Psest_3366 at 3536.392 kb on + strand, within Psest_3366 at 3536.392 kb on + strand, within Psest_3366 at 3536.393 kb on - strand, within Psest_3366 at 3536.393 kb on - strand, within Psest_3366 at 3536.393 kb on - strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.396 kb on + strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.397 kb on - strand, within Psest_3366 at 3536.404 kb on + strand, within Psest_3366 at 3536.605 kb on + strand at 3536.606 kb on - strand at 3536.633 kb on - strand at 3536.633 kb on - strand at 3536.633 kb on - strand at 3536.633 kb on - strand at 3536.636 kb on + strand at 3536.636 kb on + strand at 3536.636 kb on + strand at 3536.637 kb on - strand at 3536.637 kb on - strand at 3536.678 kb on + strand at 3536.679 kb on - strand at 3536.679 kb on - strand at 3536.679 kb on - strand at 3536.685 kb on - strand at 3536.685 kb on - strand at 3536.685 kb on - strand at 3536.685 kb on - strand at 3536.692 kb on - strand at 3536.724 kb on + strand at 3536.725 kb on - strand at 3536.725 kb on - strand at 3537.147 kb on + strand, within Psest_3367 at 3537.251 kb on - strand at 3537.295 kb on + strand at 3537.295 kb on + strand at 3537.296 kb on - strand at 3537.296 kb on - strand at 3537.296 kb on - strand at 3537.296 kb on - strand at 3537.296 kb on - strand at 3537.516 kb on + strand, within Psest_3368 at 3537.516 kb on + strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.517 kb on - strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.518 kb on + strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.519 kb on - strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.520 kb on + strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3537.521 kb on - strand, within Psest_3368 at 3538.019 kb on + strand, within Psest_3368 at 3538.036 kb on + strand, within Psest_3368 at 3538.037 kb on - strand, within Psest_3368 at 3538.037 kb on - strand, within Psest_3368 at 3538.037 kb on - strand, within Psest_3368 at 3538.037 kb on - strand, within Psest_3368 at 3538.051 kb on + strand, within Psest_3368 at 3538.052 kb on - strand, within Psest_3368 at 3538.052 kb on - strand, within Psest_3368 at 3538.052 kb on - strand, within Psest_3368 at 3538.172 kb on - strand, within Psest_3368
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 3,535,834 + Psest_3366 0.55 +1.5 3,535,834 + Psest_3366 0.55 -0.1 3,535,834 + Psest_3366 0.55 -1.8 3,535,835 - Psest_3366 0.55 -1.7 3,535,835 - Psest_3366 0.55 -3.0 3,535,835 - Psest_3366 0.55 +0.8 3,535,871 - Psest_3366 0.57 -2.1 3,535,871 - Psest_3366 0.57 +0.2 3,535,874 - Psest_3366 0.57 +0.2 3,535,903 + Psest_3366 0.58 -0.7 3,535,904 - Psest_3366 0.58 +1.0 3,536,172 + Psest_3366 0.72 +0.1 3,536,172 + Psest_3366 0.72 +0.0 3,536,173 - Psest_3366 0.72 +0.5 3,536,173 - Psest_3366 0.72 +0.2 3,536,173 - Psest_3366 0.72 +0.8 3,536,173 - Psest_3366 0.72 -0.8 3,536,173 - Psest_3366 0.72 +0.4 3,536,392 + Psest_3366 0.84 +0.8 3,536,392 + Psest_3366 0.84 -2.1 3,536,392 + Psest_3366 0.84 +0.3 3,536,392 + Psest_3366 0.84 +0.5 3,536,393 - Psest_3366 0.84 -1.3 3,536,393 - Psest_3366 0.84 +0.3 3,536,393 - Psest_3366 0.84 -1.0 3,536,396 + Psest_3366 0.84 -2.0 3,536,396 + Psest_3366 0.84 +1.4 3,536,396 + Psest_3366 0.84 +0.4 3,536,396 + Psest_3366 0.84 -0.2 3,536,396 + Psest_3366 0.84 -1.1 3,536,396 + Psest_3366 0.84 -0.9 3,536,397 - Psest_3366 0.84 -0.1 3,536,397 - Psest_3366 0.84 -1.0 3,536,397 - Psest_3366 0.84 +0.9 3,536,397 - Psest_3366 0.84 -0.8 3,536,397 - Psest_3366 0.84 +1.4 3,536,397 - Psest_3366 0.84 +0.4 3,536,404 + Psest_3366 0.85 -3.6 3,536,605 + -0.7 3,536,606 - -0.5 3,536,633 - +1.9 3,536,633 - -0.3 3,536,633 - -0.5 3,536,633 - +0.5 3,536,636 + -1.1 3,536,636 + -0.5 3,536,636 + -0.4 3,536,637 - +0.1 3,536,637 - +0.2 3,536,678 + -0.6 3,536,679 - -1.8 3,536,679 - -1.6 3,536,679 - -1.7 3,536,685 - -0.0 3,536,685 - -0.8 3,536,685 - +0.4 3,536,685 - -0.8 3,536,692 - -1.9 3,536,724 + +0.5 3,536,725 - +1.5 3,536,725 - +0.9 3,537,147 + Psest_3367 0.87 -1.3 3,537,251 - +0.9 3,537,295 + -0.5 3,537,295 + -2.1 3,537,296 - -1.6 3,537,296 - +0.9 3,537,296 - -0.2 3,537,296 - +1.1 3,537,296 - -2.0 3,537,516 + Psest_3368 0.16 -0.6 3,537,516 + Psest_3368 0.16 -0.5 3,537,517 - Psest_3368 0.16 +1.2 3,537,517 - Psest_3368 0.16 -1.4 3,537,517 - Psest_3368 0.16 -0.9 3,537,517 - Psest_3368 0.16 +0.0 3,537,517 - Psest_3368 0.16 +1.2 3,537,517 - Psest_3368 0.16 +0.2 3,537,517 - Psest_3368 0.16 -1.1 3,537,517 - Psest_3368 0.16 +0.2 3,537,517 - Psest_3368 0.16 -0.9 3,537,517 - Psest_3368 0.16 +0.2 3,537,518 + Psest_3368 0.16 -1.6 3,537,518 + Psest_3368 0.16 -0.9 3,537,518 + Psest_3368 0.16 +0.9 3,537,518 + Psest_3368 0.16 -1.3 3,537,518 + Psest_3368 0.16 -1.0 3,537,518 + Psest_3368 0.16 +0.1 3,537,518 + Psest_3368 0.16 -0.4 3,537,518 + Psest_3368 0.16 +0.3 3,537,518 + Psest_3368 0.16 +1.3 3,537,519 - Psest_3368 0.16 +0.6 3,537,519 - Psest_3368 0.16 +1.5 3,537,519 - Psest_3368 0.16 -1.1 3,537,519 - Psest_3368 0.16 -0.4 3,537,519 - Psest_3368 0.16 -0.3 3,537,519 - Psest_3368 0.16 -2.2 3,537,519 - Psest_3368 0.16 +1.1 3,537,519 - Psest_3368 0.16 +0.3 3,537,519 - Psest_3368 0.16 +0.0 3,537,519 - Psest_3368 0.16 -0.6 3,537,519 - Psest_3368 0.16 -1.6 3,537,519 - Psest_3368 0.16 -2.4 3,537,519 - Psest_3368 0.16 +0.0 3,537,519 - Psest_3368 0.16 +0.1 3,537,519 - Psest_3368 0.16 -1.8 3,537,519 - Psest_3368 0.16 -2.1 3,537,519 - Psest_3368 0.16 +1.5 3,537,519 - Psest_3368 0.16 +0.3 3,537,519 - Psest_3368 0.16 -1.0 3,537,519 - Psest_3368 0.16 +1.6 3,537,519 - Psest_3368 0.16 +0.1 3,537,519 - Psest_3368 0.16 -1.6 3,537,519 - Psest_3368 0.16 -0.8 3,537,519 - Psest_3368 0.16 +0.1 3,537,520 + Psest_3368 0.16 -0.4 3,537,520 + Psest_3368 0.16 +1.5 3,537,520 + Psest_3368 0.16 -0.1 3,537,520 + Psest_3368 0.16 +1.1 3,537,520 + Psest_3368 0.16 +0.4 3,537,520 + Psest_3368 0.16 -2.7 3,537,520 + Psest_3368 0.16 +0.3 3,537,520 + Psest_3368 0.16 +0.1 3,537,520 + Psest_3368 0.16 +0.5 3,537,520 + Psest_3368 0.16 +0.9 3,537,520 + Psest_3368 0.16 +0.3 3,537,520 + Psest_3368 0.16 -0.8 3,537,520 + Psest_3368 0.16 +0.1 3,537,520 + Psest_3368 0.16 +1.2 3,537,521 - Psest_3368 0.16 -1.2 3,537,521 - Psest_3368 0.16 -2.0 3,537,521 - Psest_3368 0.16 +1.5 3,537,521 - Psest_3368 0.16 -2.0 3,537,521 - Psest_3368 0.16 -0.4 3,537,521 - Psest_3368 0.16 -0.1 3,537,521 - Psest_3368 0.16 +0.7 3,537,521 - Psest_3368 0.16 +0.4 3,537,521 - Psest_3368 0.16 +0.2 3,537,521 - Psest_3368 0.16 -0.2 3,537,521 - Psest_3368 0.16 -1.1 3,537,521 - Psest_3368 0.16 +1.0 3,537,521 - Psest_3368 0.16 +1.9 3,537,521 - Psest_3368 0.16 -1.2 3,538,019 + Psest_3368 0.61 +2.3 3,538,036 + Psest_3368 0.63 -1.1 3,538,037 - Psest_3368 0.63 -1.1 3,538,037 - Psest_3368 0.63 -1.4 3,538,037 - Psest_3368 0.63 -0.4 3,538,037 - Psest_3368 0.63 -1.1 3,538,051 + Psest_3368 0.64 +1.6 3,538,052 - Psest_3368 0.64 -2.3 3,538,052 - Psest_3368 0.64 +0.2 3,538,052 - Psest_3368 0.64 +0.9 3,538,172 - Psest_3368 0.75 +0.4
Or see this region's nucleotide sequence