Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3235

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,405,072	-				+1.1
3,405,221	+				-0.4
3,405,221	+				+0.6
3,405,222	-				+1.0
3,405,222	-				+0.3
3,405,222	-				+0.1
3,405,272	-				-0.3
3,405,344	+				-2.0
3,405,344	+				+0.7
3,405,345	-				-2.0
3,405,351	+				-0.1
3,405,351	+				+1.7
3,405,352	-				-1.6
3,405,376	-				-0.1
3,405,405	+				-1.2
3,405,405	+				-0.4
3,405,405	+				-1.8
3,405,421	-				-3.2
3,405,421	-				+0.3
3,405,421	-				-0.9
3,405,421	-				-1.6
3,405,423	+				+0.5
3,405,423	+				-0.2
3,405,423	+				-2.7
3,405,424	-				-2.4
3,405,424	-				-0.8
3,405,424	-				-0.9
3,405,451	+				-0.1
3,405,451	+				+0.3
3,405,452	-				+0.2
3,405,452	-				-0.7
3,405,452	-				-0.2
3,405,452	-				-0.3
3,405,534	+				+1.8
3,405,585	-				-2.2
3,405,607	-				-0.5
3,405,615	+				-4.0
3,405,615	+				-0.3
3,405,615	+				-0.8
3,405,881	+		Psest_3235	0.20	-0.7
3,405,882	-		Psest_3235	0.20	-2.3
3,405,992	+		Psest_3235	0.28	-2.6
3,405,992	+		Psest_3235	0.28	-0.5
3,405,992	+		Psest_3235	0.28	-3.0
3,405,992	+		Psest_3235	0.28	-0.6
3,406,183	+		Psest_3235	0.42	-0.6
3,406,184	-		Psest_3235	0.42	-0.7
3,406,221	-		Psest_3235	0.45	-0.9
3,406,221	-		Psest_3235	0.45	-2.4
3,406,221	-		Psest_3235	0.45	-1.9
3,406,241	+		Psest_3235	0.46	-0.4
3,406,242	-		Psest_3235	0.47	-0.6
3,406,242	-		Psest_3235	0.47	+0.4
3,406,274	+		Psest_3235	0.49	-1.1
3,406,274	+		Psest_3235	0.49	+0.8
3,406,275	-		Psest_3235	0.49	-2.6
3,406,275	-		Psest_3235	0.49	-0.0
3,406,275	-		Psest_3235	0.49	+0.6
3,406,275	-		Psest_3235	0.49	-2.7
3,406,275	-		Psest_3235	0.49	-1.5
3,406,376	+		Psest_3235	0.56	-0.5
3,406,376	+		Psest_3235	0.56	-2.7
3,406,377	-		Psest_3235	0.56	-1.3
3,406,377	-		Psest_3235	0.56	-1.5
3,406,421	+		Psest_3235	0.60	-0.8
3,406,422	-		Psest_3235	0.60	-3.1
3,406,422	-		Psest_3235	0.60	-1.0
3,406,422	-		Psest_3235	0.60	-2.3
3,406,512	+		Psest_3235	0.66	+0.3
3,406,512	+		Psest_3235	0.66	-4.3
3,406,513	-		Psest_3235	0.66	-1.1
3,406,513	-		Psest_3235	0.66	-1.6
3,406,513	-		Psest_3235	0.66	-2.1
3,406,532	+		Psest_3235	0.68	-0.6
3,406,532	+		Psest_3235	0.68	-3.0
3,406,532	+		Psest_3235	0.68	-0.8
3,406,532	+		Psest_3235	0.68	-1.7
3,406,532	+		Psest_3235	0.68	-2.0
3,406,532	+		Psest_3235	0.68	-2.0
3,406,532	+		Psest_3235	0.68	-0.7
3,406,532	+		Psest_3235	0.68	-2.0
3,406,532	+		Psest_3235	0.68	-0.2
3,406,532	+		Psest_3235	0.68	-3.2
3,406,533	-		Psest_3235	0.68	-0.4
3,406,533	-		Psest_3235	0.68	-1.2
3,406,533	-		Psest_3235	0.68	-0.8
3,406,533	-		Psest_3235	0.68	+1.0
3,406,533	-		Psest_3235	0.68	-1.2
3,406,533	-		Psest_3235	0.68	+0.2
3,406,533	-		Psest_3235	0.68	-1.7
3,406,533	-		Psest_3235	0.68	+0.2
3,406,533	-		Psest_3235	0.68	-0.7
3,406,533	-		Psest_3235	0.68	-1.2
3,406,533	-		Psest_3235	0.68	-2.3
3,406,533	-		Psest_3235	0.68	-1.7
3,406,533	-		Psest_3235	0.68	-0.6
3,406,533	-		Psest_3235	0.68	-0.2
3,406,533	-		Psest_3235	0.68	-2.9
3,406,533	-		Psest_3235	0.68	-0.7
3,406,533	-		Psest_3235	0.68	-1.0
3,406,533	-		Psest_3235	0.68	+0.4
3,406,533	-		Psest_3235	0.68	+1.2
3,406,533	-		Psest_3235	0.68	-3.4
3,406,533	-		Psest_3235	0.68	-2.5
3,406,533	-		Psest_3235	0.68	-2.1
3,406,533	-		Psest_3235	0.68	-0.1
3,406,533	-		Psest_3235	0.68	-3.3
3,406,533	-		Psest_3235	0.68	-2.4
3,406,541	+		Psest_3235	0.69	-2.6
3,406,541	+		Psest_3235	0.69	-0.2
3,406,542	-		Psest_3235	0.69	+0.3
3,406,542	-		Psest_3235	0.69	-1.0
3,406,542	-		Psest_3235	0.69	-1.5
3,406,578	-		Psest_3235	0.71	-2.4
3,406,578	-		Psest_3235	0.71	-1.7
3,406,682	-		Psest_3235	0.79	-3.3
3,406,685	+		Psest_3235	0.79	-3.0
3,406,685	+		Psest_3235	0.79	-1.7
3,406,685	+		Psest_3235	0.79	-1.6
3,406,685	+		Psest_3235	0.79	-0.6
3,406,685	+		Psest_3235	0.79	+0.2
3,406,685	+		Psest_3235	0.79	-1.7
3,406,685	+		Psest_3235	0.79	-0.8
3,406,685	+		Psest_3235	0.79	-0.4
3,406,686	-		Psest_3235	0.79	+0.4
3,406,686	-		Psest_3235	0.79	-1.8
3,406,686	-		Psest_3235	0.79	-3.1
3,406,686	-		Psest_3235	0.79	-3.5
3,406,686	-		Psest_3235	0.79	-0.2
3,406,686	-		Psest_3235	0.79	+0.2
3,406,745	+		Psest_3235	0.83	+0.5
3,406,799	+		Psest_3235	0.87	-1.8
3,406,799	+		Psest_3235	0.87	+1.0
3,406,799	+		Psest_3235	0.87	-1.7
3,406,799	+		Psest_3235	0.87	-2.6
3,406,800	-		Psest_3235	0.88	+0.2
3,406,800	-		Psest_3235	0.88	-2.5
3,406,800	-		Psest_3235	0.88	-0.9
3,406,800	-		Psest_3235	0.88	-1.3
3,406,800	-		Psest_3235	0.88	+0.4
3,406,800	-		Psest_3235	0.88	+0.5
3,406,800	-		Psest_3235	0.88	-0.5
3,406,800	-		Psest_3235	0.88	+0.3
3,406,899	-				-0.4
3,406,899	-				-0.2
3,406,904	+				-0.5
3,406,904	+				-0.1
3,406,904	+				-0.4
3,406,904	+				-0.4
3,406,904	+				+1.8
3,406,905	-				-0.4
3,406,905	-				+1.0
3,406,905	-				-1.8
3,406,905	-				+1.2
3,406,905	-				-1.9
3,406,905	-				-2.0
3,406,905	-				-1.4
3,406,910	+				-2.9
3,406,910	+				-0.2
3,406,910	+				-0.4
3,406,910	+				-0.9
3,406,910	+				-0.7
3,406,910	+				-0.1
3,406,910	+				+1.0
3,406,910	+				-2.2
3,406,910	+				-2.9
3,406,910	+				-2.7
3,406,911	-				-2.9
3,406,911	-				-1.5
3,406,911	-				-1.4
3,406,911	-				-2.5
3,406,911	-				-1.2
3,406,911	-				-2.8
3,406,911	-				+0.3
3,406,911	-				+0.0
3,406,911	-				-1.5
3,406,911	-				-4.3
3,406,911	-				+0.2
3,406,911	-				-0.4
3,406,931	+				-0.6
3,406,931	+				-1.6
3,407,139	+				+0.4
3,407,311	+		Psest_3236	0.36	+1.8
3,407,312	-		Psest_3236	0.36	+1.2
3,407,335	+		Psest_3236	0.40	+0.8
3,407,335	+		Psest_3236	0.40	+0.8
3,407,335	+		Psest_3236	0.40	-2.7
3,407,335	+		Psest_3236	0.40	-2.2
3,407,335	+		Psest_3236	0.40	-1.0
3,407,335	+		Psest_3236	0.40	+1.0
3,407,336	-		Psest_3236	0.40	-2.0
3,407,377	+		Psest_3236	0.47	-1.2
3,407,724	+				-2.3
3,407,725	-				+0.8
3,407,725	-				-0.7
3,407,917	+		Psest_3237	0.33	+0.5