Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3196

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,366,844	+				+0.9
3,367,030	+		Psest_3194	0.67	-0.8
3,367,095	-				+0.7
3,367,191	+				-0.4
3,367,191	+				-2.5
3,367,191	+				-1.1
3,367,192	-				+0.3
3,367,199	-				-2.1
3,367,314	+		Psest_3195	0.21	+1.2
3,367,314	+		Psest_3195	0.21	+0.2
3,367,314	+		Psest_3195	0.21	-1.8
3,367,315	-		Psest_3195	0.21	-2.7
3,367,315	-		Psest_3195	0.21	-1.4
3,367,315	-		Psest_3195	0.21	-1.9
3,367,315	-		Psest_3195	0.21	-0.8
3,367,315	-		Psest_3195	0.21	-2.3
3,367,401	-		Psest_3195	0.36	-3.2
3,367,401	-		Psest_3195	0.36	-2.6
3,367,469	+		Psest_3195	0.48	-2.1
3,367,469	+		Psest_3195	0.48	-1.8
3,367,469	+		Psest_3195	0.48	-1.4
3,367,469	+		Psest_3195	0.48	-1.9
3,367,470	-		Psest_3195	0.48	-0.8
3,367,470	-		Psest_3195	0.48	-0.8
3,367,470	-		Psest_3195	0.48	-0.6
3,367,470	-		Psest_3195	0.48	-1.1
3,367,470	-		Psest_3195	0.48	-1.5
3,367,491	+		Psest_3195	0.52	-2.8
3,367,491	+		Psest_3195	0.52	-0.8
3,367,491	+		Psest_3195	0.52	-3.3
3,367,492	-		Psest_3195	0.52	-1.8
3,367,530	+		Psest_3195	0.58	-1.6
3,367,531	-		Psest_3195	0.59	-2.2
3,367,596	+		Psest_3195	0.70	-2.1
3,367,597	-		Psest_3195	0.70	-2.7
3,367,597	-		Psest_3195	0.70	-2.7
3,367,722	+				-2.0
3,367,723	-				-3.9
3,367,723	-				-2.9
3,367,723	-				-2.1
3,367,786	+				-0.4
3,367,885	+				-1.3
3,367,885	+				-1.0
3,367,886	-				+5.0
3,367,886	-				+4.5
3,368,113	+		Psest_3196	0.25	-0.1
3,368,152	+		Psest_3196	0.28	+0.3
3,368,170	+		Psest_3196	0.30	-0.4
3,368,281	+		Psest_3196	0.39	-0.8
3,368,281	+		Psest_3196	0.39	+1.2
3,368,282	-		Psest_3196	0.40	+3.6
3,368,413	-		Psest_3196	0.51	+0.7
3,368,602	+		Psest_3196	0.67	+1.4
3,368,602	+		Psest_3196	0.67	-0.0
3,368,603	-		Psest_3196	0.67	+1.9
3,368,619	+		Psest_3196	0.69	+0.9
3,368,619	+		Psest_3196	0.69	+1.5
3,368,620	-		Psest_3196	0.69	+1.7
3,368,620	-		Psest_3196	0.69	+2.0
3,368,620	-		Psest_3196	0.69	-1.6
3,368,620	-		Psest_3196	0.69	+2.7
3,368,620	-		Psest_3196	0.69	+3.4
3,368,620	-		Psest_3196	0.69	+0.4
3,368,686	+		Psest_3196	0.74	+1.1
3,368,686	+		Psest_3196	0.74	-2.3
3,368,687	-		Psest_3196	0.75	+1.0
3,368,852	-		Psest_3196	0.89	+2.6
3,368,852	-		Psest_3196	0.89	+2.3
3,368,852	-		Psest_3196	0.89	+1.1
3,368,852	-		Psest_3196	0.89	+4.1
3,368,852	-		Psest_3196	0.89	+2.9
3,368,992	+				-2.5
3,368,993	-				+0.6
3,369,137	+				-1.7
3,369,218	+				-2.7
3,369,218	+				-3.1
3,369,219	-				+3.5
3,369,219	-				+2.0
3,369,219	-				+3.0
3,369,219	-				+2.9
3,369,220	+				-0.5
3,369,220	+				-0.1
3,369,220	+				+0.2
3,369,220	+				-1.6
3,369,220	+				+1.0
3,369,220	+				-3.0
3,369,220	+				-0.8
3,369,221	-				+2.1
3,369,523	+		Psest_3197	0.28	-1.1
3,369,524	-		Psest_3197	0.29	+2.7
3,369,595	+		Psest_3197	0.36	+2.3
3,369,614	+		Psest_3197	0.39	+0.5
3,369,615	-		Psest_3197	0.39	+3.0
3,369,615	-		Psest_3197	0.39	-1.8
3,369,615	-		Psest_3197	0.39	+2.5
3,369,635	+		Psest_3197	0.41	+0.4
3,369,936	+		Psest_3197	0.74	-1.2