Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3173

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,343,655	+		Psest_3172	0.15	-1.0
3,343,655	+		Psest_3172	0.15	-1.1
3,343,655	+		Psest_3172	0.15	-0.8
3,343,678	+		Psest_3172	0.17	+0.8
3,343,678	+		Psest_3172	0.17	-0.3
3,343,678	+		Psest_3172	0.17	-0.1
3,344,033	-		Psest_3172	0.54	-0.1
3,344,179	-		Psest_3172	0.69	+0.6
3,344,255	+		Psest_3172	0.77	-2.9
3,344,286	+		Psest_3172	0.81	-3.5
3,344,287	-		Psest_3172	0.81	-2.8
3,344,287	-		Psest_3172	0.81	+0.3
3,344,287	-		Psest_3172	0.81	+0.6
3,344,298	+		Psest_3172	0.82	-3.2
3,344,298	+		Psest_3172	0.82	-3.7
3,344,299	-		Psest_3172	0.82	-2.1
3,344,473	-				-2.0
3,344,541	-				-0.7
3,344,572	+				-0.3
3,344,578	+				+0.9
3,344,578	+				+0.6
3,344,578	+				-0.5
3,344,579	-				+0.4
3,344,607	+				-2.7
3,344,607	+				-1.5
3,344,607	+				+0.3
3,344,607	+				+0.9
3,344,607	+				-0.4
3,344,608	-				-1.8
3,344,608	-				+0.8
3,344,608	-				-3.1
3,344,608	-				-2.9
3,344,608	-				-0.5
3,344,608	-				-3.1
3,344,688	+		Psest_3173	0.10	-2.4
3,344,689	-		Psest_3173	0.10	-1.6
3,344,871	+		Psest_3173	0.33	-1.7
3,344,872	-		Psest_3173	0.34	-2.3
3,344,898	-		Psest_3173	0.37	-0.3
3,345,039	+		Psest_3173	0.55	+0.7
3,345,132	+		Psest_3173	0.67	-3.0
3,345,133	-		Psest_3173	0.67	+0.4
3,345,133	-		Psest_3173	0.67	-3.5
3,345,133	-		Psest_3173	0.67	+1.6
3,345,210	+		Psest_3173	0.77	-2.0
3,345,211	-		Psest_3173	0.77	-3.3
3,345,229	-		Psest_3173	0.79	-2.9
3,345,229	-		Psest_3173	0.79	-1.7
3,345,229	-		Psest_3173	0.79	-3.4
3,345,578	+				+1.5
3,345,579	-				-1.0
3,345,648	+				-0.5
3,345,649	-				-0.1
3,345,709	-				-0.1
3,345,937	+				-1.2
3,345,938	-				+0.2
3,346,059	+				+1.6
3,346,101	+				-3.3
3,346,101	+				+0.2
3,346,101	+				+0.0
3,346,101	+				+0.5
3,346,101	+				-0.1
3,346,101	+				-0.2
3,346,101	+				-1.7
3,346,101	+				-1.0
3,346,101	+				+0.1
3,346,101	+				-0.6
3,346,101	+				-3.7
3,346,101	+				+0.3
3,346,101	+				-2.0
3,346,101	+				-0.1
3,346,101	+				-0.3
3,346,102	-				-0.1
3,346,102	-				-0.1
3,346,102	-				+0.3
3,346,102	-				-1.9
3,346,102	-				-0.8
3,346,102	-				-0.7
3,346,102	-				+0.0
3,346,135	+				+0.7
3,346,135	+				-0.3
3,346,135	+				+0.0
3,346,135	+				-0.5
3,346,135	+				+0.1
3,346,135	+				-1.3
3,346,135	+				+0.2
3,346,135	+				+0.1
3,346,135	+				+0.4
3,346,135	+				+0.9
3,346,136	-				+1.6
3,346,136	-				-0.1
3,346,136	-				-0.5
3,346,136	-				-0.8
3,346,136	-				-1.6
3,346,136	-				+0.2
3,346,136	-				+1.0
3,346,136	-				-3.0
3,346,136	-				-0.4
3,346,136	-				-0.3
3,346,136	-				+0.3
3,346,148	-				-0.5