Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3140

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
3,313,790	+		Psest_3137	0.85	+2.4
3,313,790	+		Psest_3137	0.85	-1.1
3,313,790	+		Psest_3137	0.85	-0.1
3,313,791	-		Psest_3137	0.85	-0.1
3,313,791	-		Psest_3137	0.85	-1.6
3,313,791	-		Psest_3137	0.85	+0.0
3,313,841	+		Psest_3137	0.90	+1.2
3,313,842	-		Psest_3137	0.90	+0.4
3,314,009	+				-0.5
3,314,009	+				+0.4
3,314,009	+				+1.1
3,314,010	-				+2.4
3,314,010	-				-0.2
3,314,238	-				-0.8
3,314,245	+				-5.5
3,314,245	+				-0.9
3,314,245	+				+0.6
3,314,246	-				+0.3
3,314,246	-				-1.2
3,314,246	-				+0.9
3,314,440	+		Psest_3139	0.47	-0.1
3,314,440	+		Psest_3139	0.47	-3.8
3,314,453	+		Psest_3139	0.49	+0.2
3,314,453	+		Psest_3139	0.49	-1.8
3,314,453	+		Psest_3139	0.49	-2.6
3,314,454	-		Psest_3139	0.49	-1.8
3,314,454	-		Psest_3139	0.49	+1.8
3,314,526	-		Psest_3139	0.63	+0.6
3,314,553	-		Psest_3139	0.68	+0.9
3,314,755	-				+0.9
3,314,836	+				-0.7
3,314,836	+				-3.0
3,314,836	+				+0.4
3,314,836	+				-0.4
3,314,837	-				-1.8
3,314,837	-				-1.1
3,314,837	-				-0.9
3,314,839	-		Psest_3140	0.10	-1.4
3,314,839	-		Psest_3140	0.10	-2.4
3,314,883	+		Psest_3140	0.16	+1.1
3,314,917	+		Psest_3140	0.21	-1.3
3,314,917	+		Psest_3140	0.21	-4.3
3,314,917	+		Psest_3140	0.21	-1.0
3,314,917	+		Psest_3140	0.21	-1.6
3,314,917	+		Psest_3140	0.21	-1.2
3,314,918	-		Psest_3140	0.21	+0.8
3,314,918	-		Psest_3140	0.21	-4.1
3,314,918	-		Psest_3140	0.21	-1.9
3,314,918	-		Psest_3140	0.21	-3.9
3,314,918	-		Psest_3140	0.21	-1.1
3,314,918	-		Psest_3140	0.21	-3.4
3,314,935	+		Psest_3140	0.23	+0.2
3,315,037	+		Psest_3140	0.37	-0.0
3,315,037	+		Psest_3140	0.37	+1.8
3,315,038	-		Psest_3140	0.37	-2.1
3,315,058	+		Psest_3140	0.40	-2.4
3,315,059	-		Psest_3140	0.40	-3.3
3,315,059	-		Psest_3140	0.40	-4.1
3,315,059	-		Psest_3140	0.40	-1.0
3,315,059	-		Psest_3140	0.40	+0.3
3,315,059	-		Psest_3140	0.40	-3.0
3,315,216	+		Psest_3140	0.62	-2.9
3,315,217	-		Psest_3140	0.62	-3.0
3,315,350	-		Psest_3140	0.80	-3.6
3,315,369	+		Psest_3140	0.83	-0.4
3,315,369	+		Psest_3140	0.83	+3.2
3,315,370	-		Psest_3140	0.83	-1.8
3,315,370	-		Psest_3140	0.83	-3.6
3,315,452	-				+0.7
3,315,538	-				+0.9
3,315,607	-				-2.6
3,315,897	+		Psest_3141	0.53	-0.5
3,315,897	+		Psest_3141	0.53	-3.8
3,315,897	+		Psest_3141	0.53	+0.8
3,315,897	+		Psest_3141	0.53	-4.0
3,315,898	-		Psest_3141	0.53	+1.4
3,315,898	-		Psest_3141	0.53	+0.9
3,315,898	-		Psest_3141	0.53	+0.2
3,315,900	-		Psest_3141	0.53	-0.2
3,315,900	-		Psest_3141	0.53	+1.0
3,315,900	-		Psest_3141	0.53	+0.0
3,315,900	-		Psest_3141	0.53	-1.7
3,315,933	+		Psest_3141	0.59	-3.2
3,315,933	+		Psest_3141	0.59	+0.7
3,315,933	+		Psest_3141	0.59	-1.9
3,315,933	+		Psest_3141	0.59	-3.2
3,315,933	+		Psest_3141	0.59	+0.4
3,315,933	+		Psest_3141	0.59	-0.7
3,315,933	+		Psest_3141	0.59	+0.4
3,315,933	+		Psest_3141	0.59	-0.5
3,315,933	+		Psest_3141	0.59	-0.6
3,315,933	+		Psest_3141	0.59	-3.0
3,315,933	+		Psest_3141	0.59	-0.3
3,315,933	+		Psest_3141	0.59	+2.3
3,315,933	+		Psest_3141	0.59	+0.8
3,315,933	+		Psest_3141	0.59	+1.0
3,315,933	+		Psest_3141	0.59	+0.3
3,315,933	+		Psest_3141	0.59	+0.6
3,315,933	+		Psest_3141	0.59	-0.1
3,315,933	+		Psest_3141	0.59	-0.0
3,315,933	+		Psest_3141	0.59	+0.1
3,315,934	-		Psest_3141	0.59	+0.0
3,315,934	-		Psest_3141	0.59	+0.8
3,315,934	-		Psest_3141	0.59	+1.1
3,315,934	-		Psest_3141	0.59	+1.6
3,315,934	-		Psest_3141	0.59	+1.1
3,315,934	-		Psest_3141	0.59	+1.5
3,315,934	-		Psest_3141	0.59	-1.7
3,315,934	-		Psest_3141	0.59	-0.5
3,315,934	-		Psest_3141	0.59	+1.2
3,315,934	-		Psest_3141	0.59	-0.2
3,315,934	-		Psest_3141	0.59	+0.6
3,315,934	-		Psest_3141	0.59	+1.5
3,315,934	-		Psest_3141	0.59	-0.6
3,315,934	-		Psest_3141	0.59	+0.5
3,315,934	-		Psest_3141	0.59	+0.3
3,315,934	-		Psest_3141	0.59	+1.6
3,315,934	-		Psest_3141	0.59	-1.1
3,315,934	-		Psest_3141	0.59	+0.6
3,316,064	-		Psest_3141	0.82	-2.6
3,316,064	-		Psest_3141	0.82	+1.1
3,316,064	-		Psest_3141	0.82	-1.6
3,316,064	-		Psest_3141	0.82	-3.5
3,316,064	-		Psest_3141	0.82	+0.9
3,316,064	-		Psest_3141	0.82	-0.5
3,316,064	-		Psest_3141	0.82	+0.2
3,316,257	+				+0.0
3,316,257	+				+0.3
3,316,258	-				-0.0
3,316,287	+		Psest_3142	0.13	-0.1
3,316,453	+		Psest_3142	0.46	-0.0
3,316,453	+		Psest_3142	0.46	+0.3
3,316,453	+		Psest_3142	0.46	-0.6
3,316,453	+		Psest_3142	0.46	+0.4
3,316,453	+		Psest_3142	0.46	+0.4
3,316,453	+		Psest_3142	0.46	-1.9
3,316,453	+		Psest_3142	0.46	+2.5
3,316,454	-		Psest_3142	0.46	+0.2
3,316,454	-		Psest_3142	0.46	+1.0
3,316,454	-		Psest_3142	0.46	+1.1
3,316,454	-		Psest_3142	0.46	+0.2
3,316,482	+		Psest_3142	0.52	-0.3
3,316,482	+		Psest_3142	0.52	+0.7
3,316,483	-		Psest_3142	0.52	+1.1
3,316,483	-		Psest_3142	0.52	+0.0
3,316,483	-		Psest_3142	0.52	+0.6
3,316,486	+		Psest_3142	0.52	+1.0
3,316,486	+		Psest_3142	0.52	-0.2
3,316,486	+		Psest_3142	0.52	+0.9
3,316,486	+		Psest_3142	0.52	+0.5
3,316,486	+		Psest_3142	0.52	+1.5
3,316,486	+		Psest_3142	0.52	+0.1
3,316,486	+		Psest_3142	0.52	+1.8
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	+0.7
3,316,486	+		Psest_3142	0.52	+0.9
3,316,486	+		Psest_3142	0.52	+0.4
3,316,486	+		Psest_3142	0.52	-1.0
3,316,486	+		Psest_3142	0.52	-0.8
3,316,487	-		Psest_3142	0.53	+0.3
3,316,487	-		Psest_3142	0.53	+0.0
3,316,487	-		Psest_3142	0.53	-0.6
3,316,487	-		Psest_3142	0.53	-1.0
3,316,487	-		Psest_3142	0.53	+1.0
3,316,487	-		Psest_3142	0.53	+0.8
3,316,487	-		Psest_3142	0.53	+0.9
3,316,487	-		Psest_3142	0.53	-0.3