Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0280 and Psest_0281 are separated by 128 nucleotides Psest_0281 and Psest_0282 are separated by 276 nucleotides Psest_0282 and Psest_0283 are separated by 9 nucleotides
Psest_0280: Psest_0280 - homoserine O-acetyltransferase, at 294,643 to 295,782
_0280
Psest_0281: Psest_0281 - Dynamin family., at 295,911 to 297,872
_0281
Psest_0282: Psest_0282 - Predicted integral membrane protein, at 298,149 to 298,739
_0282
Psest_0283: Psest_0283 - pyrroline-5-carboxylate reductase, at 298,749 to 299,573
_0283
Position (kb) 295
296
297
298 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 294.932 kb on + strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.983 kb on + strand, within Psest_0280 at 294.984 kb on - strand, within Psest_0280 at 294.984 kb on - strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.020 kb on - strand, within Psest_0280 at 295.082 kb on + strand, within Psest_0280 at 295.083 kb on - strand, within Psest_0280 at 295.083 kb on - strand, within Psest_0280 at 295.419 kb on - strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.560 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.668 kb on - strand, within Psest_0280 at 295.668 kb on - strand, within Psest_0280 at 295.826 kb on - strand at 296.399 kb on - strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.797 kb on - strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.803 kb on - strand, within Psest_0281 at 296.898 kb on + strand, within Psest_0281 at 296.899 kb on - strand, within Psest_0281 at 296.952 kb on + strand, within Psest_0281 at 296.953 kb on - strand, within Psest_0281 at 296.953 kb on - strand, within Psest_0281 at 297.441 kb on + strand, within Psest_0281 at 297.442 kb on - strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.724 kb on - strand at 297.724 kb on - strand at 297.841 kb on + strand at 297.841 kb on + strand at 297.841 kb on + strand at 297.908 kb on - strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.155 kb on - strand at 298.630 kb on + strand, within Psest_0282
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 294,932 + Psest_0280 0.25 -0.8 294,933 - Psest_0280 0.25 +0.7 294,933 - Psest_0280 0.25 +1.4 294,933 - Psest_0280 0.25 -1.0 294,933 - Psest_0280 0.25 +0.2 294,933 - Psest_0280 0.25 +0.2 294,933 - Psest_0280 0.25 +0.4 294,937 - Psest_0280 0.26 +0.8 294,937 - Psest_0280 0.26 +0.5 294,937 - Psest_0280 0.26 -0.1 294,983 + Psest_0280 0.30 +1.3 294,984 - Psest_0280 0.30 +0.1 294,984 - Psest_0280 0.30 +0.6 295,019 + Psest_0280 0.33 -1.3 295,019 + Psest_0280 0.33 -2.2 295,019 + Psest_0280 0.33 +0.4 295,019 + Psest_0280 0.33 +1.3 295,020 - Psest_0280 0.33 -2.6 295,082 + Psest_0280 0.39 -0.7 295,083 - Psest_0280 0.39 +1.0 295,083 - Psest_0280 0.39 -0.3 295,419 - Psest_0280 0.68 -0.3 295,512 + Psest_0280 0.76 -0.5 295,512 + Psest_0280 0.76 +0.1 295,512 + Psest_0280 0.76 +0.2 295,513 - Psest_0280 0.76 -1.3 295,513 - Psest_0280 0.76 -0.1 295,513 - Psest_0280 0.76 -0.7 295,516 + Psest_0280 0.77 -0.6 295,516 + Psest_0280 0.77 +0.7 295,516 + Psest_0280 0.77 -1.3 295,516 + Psest_0280 0.77 -0.2 295,516 + Psest_0280 0.77 -0.6 295,516 + Psest_0280 0.77 -0.9 295,516 + Psest_0280 0.77 +0.3 295,516 + Psest_0280 0.77 -1.2 295,516 + Psest_0280 0.77 -0.1 295,516 + Psest_0280 0.77 +1.9 295,516 + Psest_0280 0.77 +0.8 295,517 - Psest_0280 0.77 +0.6 295,517 - Psest_0280 0.77 +0.0 295,517 - Psest_0280 0.77 +0.2 295,517 - Psest_0280 0.77 +2.5 295,517 - Psest_0280 0.77 -0.5 295,560 + Psest_0280 0.80 -1.5 295,658 + Psest_0280 0.89 +0.5 295,658 + Psest_0280 0.89 +1.3 295,658 + Psest_0280 0.89 -0.7 295,658 + Psest_0280 0.89 -1.2 295,658 + Psest_0280 0.89 -0.0 295,659 - Psest_0280 0.89 -2.2 295,659 - Psest_0280 0.89 -0.1 295,659 - Psest_0280 0.89 -1.7 295,659 - Psest_0280 0.89 -0.1 295,659 - Psest_0280 0.89 -0.2 295,659 - Psest_0280 0.89 -0.7 295,659 - Psest_0280 0.89 -0.9 295,668 - Psest_0280 0.90 +0.5 295,668 - Psest_0280 0.90 -0.8 295,826 - -1.9 296,399 - Psest_0281 0.25 -0.5 296,757 + Psest_0281 0.43 +1.3 296,757 + Psest_0281 0.43 -0.4 296,757 + Psest_0281 0.43 -0.1 296,758 - Psest_0281 0.43 +0.7 296,758 - Psest_0281 0.43 -1.3 296,758 - Psest_0281 0.43 +0.1 296,758 - Psest_0281 0.43 +2.2 296,758 - Psest_0281 0.43 -0.6 296,758 - Psest_0281 0.43 +1.9 296,758 - Psest_0281 0.43 +0.4 296,758 - Psest_0281 0.43 -1.5 296,797 - Psest_0281 0.45 +0.1 296,802 + Psest_0281 0.45 +0.3 296,802 + Psest_0281 0.45 +0.2 296,802 + Psest_0281 0.45 -0.5 296,803 - Psest_0281 0.45 -1.2 296,898 + Psest_0281 0.50 +0.5 296,899 - Psest_0281 0.50 -1.3 296,952 + Psest_0281 0.53 +1.3 296,953 - Psest_0281 0.53 -0.6 296,953 - Psest_0281 0.53 +1.4 297,441 + Psest_0281 0.78 +0.5 297,442 - Psest_0281 0.78 +0.4 297,550 + Psest_0281 0.84 +0.8 297,550 + Psest_0281 0.84 +0.3 297,550 + Psest_0281 0.84 -0.3 297,551 - Psest_0281 0.84 +0.9 297,551 - Psest_0281 0.84 -2.3 297,551 - Psest_0281 0.84 -0.3 297,551 - Psest_0281 0.84 +3.1 297,551 - Psest_0281 0.84 +0.5 297,551 - Psest_0281 0.84 -0.9 297,637 + Psest_0281 0.88 -2.2 297,637 + Psest_0281 0.88 -1.3 297,637 + Psest_0281 0.88 -2.2 297,638 - Psest_0281 0.88 -1.7 297,638 - Psest_0281 0.88 +1.7 297,638 - Psest_0281 0.88 +1.4 297,724 - -1.7 297,724 - +0.3 297,841 + -2.4 297,841 + -0.5 297,841 + +0.5 297,908 - +1.4 298,073 + -1.5 298,073 + +0.3 298,073 + -0.3 298,073 + -0.3 298,074 - -0.8 298,074 - -0.1 298,074 - -2.8 298,074 - +0.3 298,074 - +0.1 298,074 - -2.1 298,074 - -1.2 298,074 - -0.1 298,077 + -0.8 298,077 + -2.0 298,077 + -0.2 298,078 - -0.3 298,078 - +0.2 298,078 - +1.5 298,078 - -2.6 298,155 - -1.9 298,630 + Psest_0282 0.81 +0.9
Or see this region's nucleotide sequence