Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0257 and Psest_0258 are separated by 229 nucleotides Psest_0258 and Psest_0259 overlap by 4 nucleotides Psest_0259 and Psest_0260 overlap by 4 nucleotides
Psest_0257: Psest_0257 - Predicted Zn-dependent peptidases, at 270,997 to 272,349
_0257
Psest_0258: Psest_0258 - signal recognition particle-docking protein FtsY, at 272,579 to 273,859
_0258
Psest_0259: Psest_0259 - cell division ATP-binding protein FtsE, at 273,856 to 274,527
_0259
Psest_0260: Psest_0260 - Cell division protein, at 274,524 to 275,543
_0260
Position (kb) 272
273
274 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 271.731 kb on - strand, within Psest_0257 at 271.850 kb on + strand, within Psest_0257 at 272.181 kb on - strand, within Psest_0257 at 272.350 kb on - strand at 272.350 kb on - strand at 272.459 kb on + strand at 272.512 kb on + strand at 272.512 kb on + strand at 272.512 kb on + strand at 272.517 kb on + strand at 272.552 kb on + strand at 272.569 kb on + strand at 272.569 kb on + strand at 272.569 kb on + strand at 274.314 kb on - strand, within Psest_0259 at 274.347 kb on + strand, within Psest_0259
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 271,731 - Psest_0257 0.54 -0.3 271,850 + Psest_0257 0.63 +0.9 272,181 - Psest_0257 0.88 -0.3 272,350 - -0.3 272,350 - -0.0 272,459 + -0.3 272,512 + -2.3 272,512 + -1.2 272,512 + +0.7 272,517 + -4.0 272,552 + +3.0 272,569 + +0.3 272,569 + +1.3 272,569 + +2.4 274,314 - Psest_0259 0.68 -3.2 274,347 + Psest_0259 0.73 -3.3
Or see this region's nucleotide sequence