Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0251 and Psest_0252 are separated by 35 nucleotides Psest_0252 and Psest_0253 overlap by 11 nucleotides Psest_0253 and Psest_0254 are separated by 173 nucleotides Psest_0254 and Psest_0255 are separated by 11 nucleotides
Psest_0251: Psest_0251 - hypothetical protein, at 263,451 to 266,453
_0251
Psest_0252: Psest_0252 - hypothetical protein, at 266,489 to 267,283
_0252
Psest_0253: Psest_0253 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 267,273 to 268,259
_0253
Psest_0254: Psest_0254 - hypothetical protein, at 268,433 to 268,837
_0254
Psest_0255: Psest_0255 - RNA methyltransferase, RsmD family, at 268,849 to 269,463
_0255
Position (kb) 267
268
269 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 266.363 kb on + strand at 266.379 kb on + strand at 266.379 kb on + strand at 266.380 kb on - strand at 266.380 kb on - strand at 266.380 kb on - strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.404 kb on + strand at 266.405 kb on - strand at 266.405 kb on - strand at 266.405 kb on - strand at 266.406 kb on + strand at 266.406 kb on + strand at 266.406 kb on + strand at 266.406 kb on + strand at 266.407 kb on - strand at 266.488 kb on - strand at 266.488 kb on - strand at 266.720 kb on + strand, within Psest_0252 at 266.805 kb on + strand, within Psest_0252 at 266.806 kb on - strand, within Psest_0252 at 266.817 kb on + strand, within Psest_0252 at 266.817 kb on + strand, within Psest_0252 at 266.817 kb on + strand, within Psest_0252 at 266.817 kb on + strand, within Psest_0252 at 266.823 kb on + strand, within Psest_0252 at 266.823 kb on + strand, within Psest_0252 at 266.823 kb on + strand, within Psest_0252 at 266.824 kb on - strand, within Psest_0252 at 266.824 kb on - strand, within Psest_0252 at 266.824 kb on - strand, within Psest_0252 at 266.852 kb on + strand, within Psest_0252 at 266.852 kb on + strand, within Psest_0252 at 266.910 kb on + strand, within Psest_0252 at 266.911 kb on - strand, within Psest_0252 at 266.922 kb on + strand, within Psest_0252 at 266.922 kb on + strand, within Psest_0252 at 266.922 kb on + strand, within Psest_0252 at 266.922 kb on + strand, within Psest_0252 at 266.923 kb on - strand, within Psest_0252 at 266.923 kb on - strand, within Psest_0252 at 266.923 kb on - strand, within Psest_0252 at 266.923 kb on - strand, within Psest_0252 at 266.955 kb on + strand, within Psest_0252 at 266.955 kb on + strand, within Psest_0252 at 266.955 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.961 kb on + strand, within Psest_0252 at 266.962 kb on - strand, within Psest_0252 at 266.962 kb on - strand, within Psest_0252 at 266.962 kb on - strand, within Psest_0252 at 266.962 kb on - strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.969 kb on + strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.970 kb on - strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.971 kb on + strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 266.972 kb on - strand, within Psest_0252 at 267.134 kb on - strand, within Psest_0252 at 267.154 kb on + strand, within Psest_0252 at 267.175 kb on + strand, within Psest_0252 at 267.176 kb on - strand, within Psest_0252 at 267.242 kb on + strand at 267.242 kb on + strand at 267.242 kb on + strand at 267.242 kb on + strand at 267.243 kb on - strand at 267.243 kb on - strand at 267.244 kb on + strand at 267.244 kb on + strand at 267.244 kb on + strand at 267.244 kb on + strand at 267.244 kb on + strand at 267.245 kb on - strand at 267.245 kb on - strand at 267.282 kb on - strand at 267.319 kb on + strand at 267.319 kb on + strand at 267.320 kb on - strand at 267.320 kb on - strand at 267.320 kb on - strand at 267.320 kb on - strand at 267.323 kb on - strand at 267.435 kb on + strand, within Psest_0253 at 267.493 kb on + strand, within Psest_0253 at 267.494 kb on - strand, within Psest_0253 at 267.494 kb on - strand, within Psest_0253 at 267.494 kb on - strand, within Psest_0253 at 267.494 kb on - strand, within Psest_0253 at 267.520 kb on + strand, within Psest_0253 at 267.520 kb on + strand, within Psest_0253 at 267.538 kb on + strand, within Psest_0253 at 267.584 kb on + strand, within Psest_0253 at 267.584 kb on + strand, within Psest_0253 at 267.585 kb on - strand, within Psest_0253 at 267.585 kb on - strand, within Psest_0253 at 267.585 kb on - strand, within Psest_0253 at 267.676 kb on + strand, within Psest_0253 at 267.676 kb on + strand, within Psest_0253 at 267.677 kb on - strand, within Psest_0253 at 267.677 kb on - strand, within Psest_0253 at 267.677 kb on - strand, within Psest_0253 at 267.677 kb on - strand, within Psest_0253 at 267.677 kb on - strand, within Psest_0253 at 267.709 kb on + strand, within Psest_0253 at 267.709 kb on + strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.710 kb on - strand, within Psest_0253 at 267.820 kb on + strand, within Psest_0253 at 267.820 kb on + strand, within Psest_0253 at 267.821 kb on - strand, within Psest_0253 at 267.821 kb on - strand, within Psest_0253 at 267.831 kb on + strand, within Psest_0253 at 267.831 kb on + strand, within Psest_0253 at 267.831 kb on + strand, within Psest_0253 at 267.831 kb on + strand, within Psest_0253 at 267.831 kb on + strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.832 kb on - strand, within Psest_0253 at 267.843 kb on + strand, within Psest_0253 at 267.862 kb on + strand, within Psest_0253 at 267.862 kb on + strand, within Psest_0253 at 267.863 kb on - strand, within Psest_0253 at 268.040 kb on - strand, within Psest_0253 at 268.040 kb on - strand, within Psest_0253 at 268.040 kb on - strand, within Psest_0253 at 268.204 kb on - strand at 268.358 kb on + strand at 268.358 kb on + strand at 268.358 kb on + strand at 268.358 kb on + strand at 268.358 kb on + strand at 268.358 kb on + strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.359 kb on - strand at 268.367 kb on - strand at 268.372 kb on + strand at 268.372 kb on + strand at 268.388 kb on + strand at 268.388 kb on + strand at 268.388 kb on + strand at 268.783 kb on + strand, within Psest_0254 at 268.833 kb on - strand at 268.982 kb on + strand, within Psest_0255
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 266,363 + -0.1 266,379 + +2.4 266,379 + -0.7 266,380 - +0.3 266,380 - -0.0 266,380 - -1.9 266,404 + -0.7 266,404 + -0.3 266,404 + +1.3 266,404 + -0.4 266,404 + +0.1 266,404 + +0.5 266,404 + +1.3 266,405 - -0.5 266,405 - -1.9 266,405 - +0.7 266,406 + -0.7 266,406 + -0.8 266,406 + +0.3 266,406 + +0.5 266,407 - -0.8 266,488 - +0.9 266,488 - +1.1 266,720 + Psest_0252 0.29 -1.0 266,805 + Psest_0252 0.40 +5.1 266,806 - Psest_0252 0.40 +0.3 266,817 + Psest_0252 0.41 +1.3 266,817 + Psest_0252 0.41 -0.5 266,817 + Psest_0252 0.41 -2.6 266,817 + Psest_0252 0.41 +0.7 266,823 + Psest_0252 0.42 +1.6 266,823 + Psest_0252 0.42 -0.4 266,823 + Psest_0252 0.42 +0.9 266,824 - Psest_0252 0.42 +2.3 266,824 - Psest_0252 0.42 -1.0 266,824 - Psest_0252 0.42 +1.0 266,852 + Psest_0252 0.46 +2.6 266,852 + Psest_0252 0.46 -2.2 266,910 + Psest_0252 0.53 -1.7 266,911 - Psest_0252 0.53 +0.1 266,922 + Psest_0252 0.54 -0.5 266,922 + Psest_0252 0.54 +1.9 266,922 + Psest_0252 0.54 +1.5 266,922 + Psest_0252 0.54 +1.3 266,923 - Psest_0252 0.55 +1.4 266,923 - Psest_0252 0.55 +0.3 266,923 - Psest_0252 0.55 -2.8 266,923 - Psest_0252 0.55 +0.5 266,955 + Psest_0252 0.59 +1.3 266,955 + Psest_0252 0.59 -1.3 266,955 + Psest_0252 0.59 +0.9 266,961 + Psest_0252 0.59 +0.1 266,961 + Psest_0252 0.59 -2.0 266,961 + Psest_0252 0.59 -0.1 266,961 + Psest_0252 0.59 -1.9 266,961 + Psest_0252 0.59 -4.2 266,961 + Psest_0252 0.59 +3.4 266,961 + Psest_0252 0.59 +3.6 266,961 + Psest_0252 0.59 +0.4 266,961 + Psest_0252 0.59 +0.1 266,961 + Psest_0252 0.59 -0.3 266,961 + Psest_0252 0.59 +1.3 266,962 - Psest_0252 0.59 -0.0 266,962 - Psest_0252 0.59 -0.2 266,962 - Psest_0252 0.59 -1.0 266,962 - Psest_0252 0.59 -0.0 266,969 + Psest_0252 0.60 +0.0 266,969 + Psest_0252 0.60 +0.8 266,969 + Psest_0252 0.60 -1.0 266,969 + Psest_0252 0.60 +0.7 266,969 + Psest_0252 0.60 -1.4 266,969 + Psest_0252 0.60 +0.1 266,969 + Psest_0252 0.60 -0.7 266,969 + Psest_0252 0.60 +2.6 266,969 + Psest_0252 0.60 -1.2 266,969 + Psest_0252 0.60 -2.3 266,970 - Psest_0252 0.61 -2.0 266,970 - Psest_0252 0.61 -1.7 266,970 - Psest_0252 0.61 -0.7 266,970 - Psest_0252 0.61 -0.7 266,970 - Psest_0252 0.61 -0.5 266,970 - Psest_0252 0.61 -1.0 266,970 - Psest_0252 0.61 -0.1 266,970 - Psest_0252 0.61 +0.3 266,970 - Psest_0252 0.61 -1.4 266,971 + Psest_0252 0.61 +1.3 266,971 + Psest_0252 0.61 +0.1 266,971 + Psest_0252 0.61 +0.1 266,971 + Psest_0252 0.61 +0.2 266,971 + Psest_0252 0.61 -0.6 266,971 + Psest_0252 0.61 -0.5 266,971 + Psest_0252 0.61 -0.0 266,971 + Psest_0252 0.61 -0.3 266,971 + Psest_0252 0.61 +0.3 266,971 + Psest_0252 0.61 +2.3 266,971 + Psest_0252 0.61 -0.1 266,971 + Psest_0252 0.61 -1.0 266,971 + Psest_0252 0.61 +1.3 266,972 - Psest_0252 0.61 +0.2 266,972 - Psest_0252 0.61 +0.9 266,972 - Psest_0252 0.61 -1.5 266,972 - Psest_0252 0.61 +2.2 266,972 - Psest_0252 0.61 +0.2 266,972 - Psest_0252 0.61 -0.9 266,972 - Psest_0252 0.61 -1.5 266,972 - Psest_0252 0.61 -0.7 266,972 - Psest_0252 0.61 +0.3 266,972 - Psest_0252 0.61 -1.0 266,972 - Psest_0252 0.61 +0.5 266,972 - Psest_0252 0.61 +0.4 266,972 - Psest_0252 0.61 -2.6 266,972 - Psest_0252 0.61 +1.9 266,972 - Psest_0252 0.61 -2.2 266,972 - Psest_0252 0.61 -0.3 266,972 - Psest_0252 0.61 -1.0 266,972 - Psest_0252 0.61 -1.0 266,972 - Psest_0252 0.61 +1.6 267,134 - Psest_0252 0.81 -0.2 267,154 + Psest_0252 0.84 -0.0 267,175 + Psest_0252 0.86 +0.7 267,176 - Psest_0252 0.86 -1.3 267,242 + -1.5 267,242 + +0.1 267,242 + +0.3 267,242 + +0.3 267,243 - +0.2 267,243 - -0.1 267,244 + -1.4 267,244 + -0.3 267,244 + -0.1 267,244 + +1.0 267,244 + +0.2 267,245 - -1.5 267,245 - +0.8 267,282 - -0.0 267,319 + +2.5 267,319 + -2.3 267,320 - +0.6 267,320 - +0.4 267,320 - -0.1 267,320 - +1.9 267,323 - -1.7 267,435 + Psest_0253 0.16 -1.3 267,493 + Psest_0253 0.22 +1.0 267,494 - Psest_0253 0.22 +0.6 267,494 - Psest_0253 0.22 +0.7 267,494 - Psest_0253 0.22 +2.5 267,494 - Psest_0253 0.22 +0.7 267,520 + Psest_0253 0.25 -0.7 267,520 + Psest_0253 0.25 +0.6 267,538 + Psest_0253 0.27 -1.3 267,584 + Psest_0253 0.32 -0.3 267,584 + Psest_0253 0.32 -0.7 267,585 - Psest_0253 0.32 -1.5 267,585 - Psest_0253 0.32 -2.5 267,585 - Psest_0253 0.32 -2.3 267,676 + Psest_0253 0.41 +0.4 267,676 + Psest_0253 0.41 +1.9 267,677 - Psest_0253 0.41 +1.3 267,677 - Psest_0253 0.41 -0.7 267,677 - Psest_0253 0.41 +2.1 267,677 - Psest_0253 0.41 -1.9 267,677 - Psest_0253 0.41 +0.9 267,709 + Psest_0253 0.44 +1.3 267,709 + Psest_0253 0.44 +2.0 267,710 - Psest_0253 0.44 -0.0 267,710 - Psest_0253 0.44 +0.3 267,710 - Psest_0253 0.44 -3.6 267,710 - Psest_0253 0.44 +0.5 267,710 - Psest_0253 0.44 -1.3 267,710 - Psest_0253 0.44 +2.3 267,820 + Psest_0253 0.55 -1.8 267,820 + Psest_0253 0.55 -1.5 267,821 - Psest_0253 0.56 -0.2 267,821 - Psest_0253 0.56 +1.4 267,831 + Psest_0253 0.57 +1.2 267,831 + Psest_0253 0.57 +0.4 267,831 + Psest_0253 0.57 -1.5 267,831 + Psest_0253 0.57 +3.2 267,831 + Psest_0253 0.57 +2.3 267,832 - Psest_0253 0.57 +0.8 267,832 - Psest_0253 0.57 +1.3 267,832 - Psest_0253 0.57 +3.8 267,832 - Psest_0253 0.57 -0.7 267,832 - Psest_0253 0.57 +0.7 267,832 - Psest_0253 0.57 +0.0 267,832 - Psest_0253 0.57 -1.0 267,843 + Psest_0253 0.58 +1.3 267,862 + Psest_0253 0.60 -0.7 267,862 + Psest_0253 0.60 -0.4 267,863 - Psest_0253 0.60 +1.4 268,040 - Psest_0253 0.78 +1.1 268,040 - Psest_0253 0.78 -1.0 268,040 - Psest_0253 0.78 +0.0 268,204 - -1.0 268,358 + +0.1 268,358 + -1.0 268,358 + +0.6 268,358 + +3.6 268,358 + +0.5 268,358 + +1.4 268,359 - +0.9 268,359 - -0.4 268,359 - -2.0 268,359 - +1.6 268,359 - -1.0 268,359 - +1.4 268,359 - -0.0 268,359 - -2.5 268,367 - +2.1 268,372 + -1.7 268,372 + +0.3 268,388 + +0.1 268,388 + -0.7 268,388 + +0.3 268,783 + Psest_0254 0.86 -1.0 268,833 - +0.7 268,982 + Psest_0255 0.22 +0.5
Or see this region's nucleotide sequence