Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2521

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
2,698,566	-		Psest_2520	0.79	+0.9
2,698,836	-				+1.2
2,698,966	+				+0.6
2,698,966	+				+0.8
2,698,966	+				+0.2
2,698,966	+				+0.6
2,698,967	-				+0.6
2,698,967	-				-0.9
2,698,967	-				-1.9
2,698,967	-				-2.5
2,698,967	-				-0.3
2,698,967	-				+0.0
2,698,967	-				-1.0
2,698,971	+				+0.1
2,699,085	+				+0.1
2,699,086	-				-1.5
2,699,086	-				-1.4
2,699,086	-				+6.0
2,699,086	-				+1.6
2,699,086	-				+0.8
2,699,086	-				-1.1
2,699,086	-				-0.7
2,699,091	+				-1.1
2,699,091	+				+1.0
2,699,091	+				-2.0
2,699,092	-				+0.2
2,699,092	-				-1.0
2,699,094	+				-0.1
2,699,095	-				+1.4
2,699,152	+				+2.0
2,699,153	-				-1.1
2,699,153	-				+1.5
2,699,153	-				-2.2
2,699,158	+				-0.7
2,699,158	+				-0.7
2,699,158	+				-1.0
2,699,158	+				+0.5
2,699,159	-				+1.1
2,699,159	-				-2.3
2,699,159	-				+2.1
2,699,159	-				+0.2
2,699,159	-				-1.0
2,699,159	-				-1.1
2,699,587	-		Psest_2521	0.21	+0.1
2,699,889	+		Psest_2521	0.32	-2.4
2,699,889	+		Psest_2521	0.32	-1.0
2,700,054	+		Psest_2521	0.38	+0.4
2,700,054	+		Psest_2521	0.38	+0.9
2,700,332	+		Psest_2521	0.49	-1.5
2,700,333	-		Psest_2521	0.49	+2.1
2,700,333	-		Psest_2521	0.49	-0.2
2,700,368	-		Psest_2521	0.50	+0.5
2,700,534	-		Psest_2521	0.56	-0.2
2,700,623	+		Psest_2521	0.60	+0.5
2,700,623	+		Psest_2521	0.60	-0.6
2,700,716	+		Psest_2521	0.63	+0.8
2,700,716	+		Psest_2521	0.63	-0.8
2,700,768	+		Psest_2521	0.65	+2.5
2,700,769	-		Psest_2521	0.65	-2.5
2,700,780	-		Psest_2521	0.65	-0.3
2,700,908	+		Psest_2521	0.70	-4.1
2,700,912	+		Psest_2521	0.70	-2.1
2,700,912	+		Psest_2521	0.70	+0.1
2,700,913	-		Psest_2521	0.70	-1.8
2,700,926	+		Psest_2521	0.71	+0.5
2,700,926	+		Psest_2521	0.71	+0.3
2,700,936	+		Psest_2521	0.71	-1.3
2,700,936	+		Psest_2521	0.71	+0.1
2,700,936	+		Psest_2521	0.71	-2.4
2,700,937	-		Psest_2521	0.71	+1.0
2,700,937	-		Psest_2521	0.71	-2.1
2,700,937	-		Psest_2521	0.71	-0.8
2,700,955	-		Psest_2521	0.72	+0.7
2,701,095	+		Psest_2521	0.77	+0.6
2,701,095	+		Psest_2521	0.77	+0.5
2,701,242	+		Psest_2521	0.83	-2.5
2,701,242	+		Psest_2521	0.83	-2.0
2,701,242	+		Psest_2521	0.83	-1.0
2,701,243	-		Psest_2521	0.83	-0.6
2,701,243	-		Psest_2521	0.83	+0.3
2,701,243	-		Psest_2521	0.83	-3.1
2,701,272	+		Psest_2521	0.84	+0.6
2,701,272	+		Psest_2521	0.84	-1.4
2,701,272	+		Psest_2521	0.84	-0.6
2,701,272	+		Psest_2521	0.84	-3.0
2,701,273	-		Psest_2521	0.84	-1.2
2,701,273	-		Psest_2521	0.84	+0.2
2,701,273	-		Psest_2521	0.84	-0.7
2,701,273	-		Psest_2521	0.84	-1.1
2,701,273	-		Psest_2521	0.84	-2.3
2,701,273	-		Psest_2521	0.84	-2.3
2,701,273	-		Psest_2521	0.84	+2.1
2,701,273	-		Psest_2521	0.84	-1.3
2,701,335	+		Psest_2521	0.86	-1.6
2,701,385	-		Psest_2521	0.88	-2.4
2,701,628	+				-0.1
2,701,647	+				-0.8
2,701,648	-				-1.1
2,701,648	-				-3.0
2,701,648	-				-1.2
2,701,674	+				-3.1
2,701,674	+				+1.7
2,701,674	+				-0.3
2,701,675	-				-0.5
2,701,675	-				+1.2
2,701,860	+				+0.0
2,702,006	+				+0.9
2,702,033	+				-1.0
2,702,034	-				+0.0
2,702,034	-				-0.9
2,702,055	-				-0.3
2,702,055	-				-0.8
2,702,055	-				+0.6
2,702,060	+				+0.8
2,702,060	+				+1.4
2,702,060	+				+0.6
2,702,061	-				-1.4
2,702,116	+				+1.1
2,702,117	-				+0.8
2,702,117	-				+0.9
2,702,142	-				+0.3
2,702,176	+				-0.9
2,702,176	+				+0.0
2,702,177	-				-1.0
2,702,177	-				+0.2
2,702,177	-				+2.5
2,702,196	-				-1.2
2,702,229	-				-0.7
2,702,286	+		Psest_2522	0.13	+2.4
2,702,286	+		Psest_2522	0.13	-0.0
2,702,286	+		Psest_2522	0.13	-0.8
2,702,286	+		Psest_2522	0.13	-0.8
2,702,286	+		Psest_2522	0.13	-1.1
2,702,286	+		Psest_2522	0.13	-1.0
2,702,286	+		Psest_2522	0.13	-2.8
2,702,286	+		Psest_2522	0.13	+0.6
2,702,287	-		Psest_2522	0.13	-0.3
2,702,287	-		Psest_2522	0.13	-0.5
2,702,287	-		Psest_2522	0.13	+0.3
2,702,287	-		Psest_2522	0.13	-2.7
2,702,287	-		Psest_2522	0.13	-0.2
2,702,287	-		Psest_2522	0.13	-1.3
2,702,287	-		Psest_2522	0.13	-2.0
2,702,287	-		Psest_2522	0.13	-0.7
2,702,287	-		Psest_2522	0.13	-0.5
2,702,287	-		Psest_2522	0.13	-0.3
2,702,374	+		Psest_2522	0.19	-0.1
2,702,374	+		Psest_2522	0.19	-0.9
2,702,374	+		Psest_2522	0.19	+1.0
2,702,374	+		Psest_2522	0.19	-1.2
2,702,374	+		Psest_2522	0.19	-1.1
2,702,375	-		Psest_2522	0.19	+2.3
2,702,375	-		Psest_2522	0.19	+1.1
2,702,375	-		Psest_2522	0.19	+0.5
2,702,417	-		Psest_2522	0.21	+1.5
2,702,473	+		Psest_2522	0.25	-1.5
2,702,474	-		Psest_2522	0.25	+0.7
2,702,474	-		Psest_2522	0.25	-0.3
2,702,474	-		Psest_2522	0.25	-0.6
2,702,474	-		Psest_2522	0.25	+1.2
2,702,474	-		Psest_2522	0.25	+0.4