Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2410 and Psest_2411 are separated by 207 nucleotides Psest_2411 and Psest_2412 are separated by 43 nucleotides
Psest_2410: Psest_2410 - Superfamily I DNA and RNA helicases, at 2,565,949 to 2,567,919
_2410
Psest_2411: Psest_2411 - PAS domain S-box, at 2,568,127 to 2,571,120
_2411
Psest_2412: Psest_2412 - Predicted phosphatase, at 2,571,164 to 2,573,125
_2412
Position (kb)
2568
2569
2570
2571
2572 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2567.141 kb on + strand, within Psest_2410 at 2567.153 kb on + strand, within Psest_2410 at 2567.154 kb on - strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.663 kb on + strand, within Psest_2410 at 2567.664 kb on - strand, within Psest_2410 at 2567.664 kb on - strand, within Psest_2410 at 2567.853 kb on + strand at 2567.854 kb on - strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.170 kb on + strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.171 kb on - strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.343 kb on + strand at 2568.742 kb on + strand, within Psest_2411 at 2568.743 kb on - strand, within Psest_2411 at 2568.995 kb on - strand, within Psest_2411 at 2569.165 kb on + strand, within Psest_2411 at 2569.166 kb on - strand, within Psest_2411 at 2569.290 kb on - strand, within Psest_2411 at 2569.400 kb on + strand, within Psest_2411 at 2569.400 kb on + strand, within Psest_2411 at 2569.513 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.658 kb on - strand, within Psest_2411 at 2569.693 kb on + strand, within Psest_2411 at 2569.856 kb on + strand, within Psest_2411 at 2569.856 kb on + strand, within Psest_2411 at 2569.857 kb on - strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2570.291 kb on + strand, within Psest_2411 at 2571.307 kb on + strand at 2571.336 kb on - strand at 2571.351 kb on - strand at 2571.351 kb on - strand at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.723 kb on + strand, within Psest_2412 at 2571.724 kb on - strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.921 kb on + strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.922 kb on - strand, within Psest_2412 at 2571.999 kb on + strand, within Psest_2412 at 2572.000 kb on - strand, within Psest_2412 at 2572.000 kb on - strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.005 kb on + strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.006 kb on - strand, within Psest_2412 at 2572.032 kb on + strand, within Psest_2412 at 2572.033 kb on - strand, within Psest_2412 at 2572.033 kb on - strand, within Psest_2412
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 2,567,141 + Psest_2410 0.60 -1.7 2,567,153 + Psest_2410 0.61 +0.7 2,567,154 - Psest_2410 0.61 -2.1 2,567,663 + Psest_2410 0.87 -0.1 2,567,663 + Psest_2410 0.87 +0.5 2,567,663 + Psest_2410 0.87 +0.7 2,567,664 - Psest_2410 0.87 -1.3 2,567,664 - Psest_2410 0.87 -1.9 2,567,853 + -1.3 2,567,854 - -0.8 2,568,170 + +0.6 2,568,170 + +0.8 2,568,170 + -1.5 2,568,170 + -1.0 2,568,170 + -1.5 2,568,170 + +1.3 2,568,170 + -0.5 2,568,170 + +0.2 2,568,170 + -0.9 2,568,171 - +0.2 2,568,171 - +0.5 2,568,171 - +4.2 2,568,171 - +0.7 2,568,171 - +0.9 2,568,171 - +1.3 2,568,171 - -1.9 2,568,171 - +1.1 2,568,171 - -1.3 2,568,171 - -0.8 2,568,171 - -0.3 2,568,171 - +0.8 2,568,171 - -0.2 2,568,171 - +0.4 2,568,171 - -0.3 2,568,171 - -0.9 2,568,171 - -1.3 2,568,171 - -1.9 2,568,343 + -1.4 2,568,343 + -0.9 2,568,343 + +0.1 2,568,343 + -2.7 2,568,742 + Psest_2411 0.21 -0.5 2,568,743 - Psest_2411 0.21 -0.7 2,568,995 - Psest_2411 0.29 -3.1 2,569,165 + Psest_2411 0.35 +0.5 2,569,166 - Psest_2411 0.35 +0.1 2,569,290 - Psest_2411 0.39 -2.3 2,569,400 + Psest_2411 0.43 -1.3 2,569,400 + Psest_2411 0.43 +1.1 2,569,513 - Psest_2411 0.46 -0.5 2,569,658 - Psest_2411 0.51 -0.9 2,569,658 - Psest_2411 0.51 -0.7 2,569,658 - Psest_2411 0.51 +1.1 2,569,658 - Psest_2411 0.51 +1.1 2,569,693 + Psest_2411 0.52 -0.9 2,569,856 + Psest_2411 0.58 -2.1 2,569,856 + Psest_2411 0.58 -1.9 2,569,857 - Psest_2411 0.58 +0.3 2,570,291 + Psest_2411 0.72 +2.1 2,570,291 + Psest_2411 0.72 -0.9 2,570,291 + Psest_2411 0.72 -1.9 2,570,291 + Psest_2411 0.72 -1.8 2,570,291 + Psest_2411 0.72 +0.5 2,571,307 + -1.8 2,571,336 - +2.5 2,571,351 - +1.1 2,571,351 - -0.9 2,571,723 + Psest_2412 0.28 +0.1 2,571,723 + Psest_2412 0.28 +2.6 2,571,723 + Psest_2412 0.28 +0.1 2,571,723 + Psest_2412 0.28 +1.1 2,571,724 - Psest_2412 0.29 +0.1 2,571,921 + Psest_2412 0.39 +2.4 2,571,921 + Psest_2412 0.39 +0.1 2,571,921 + Psest_2412 0.39 +0.4 2,571,921 + Psest_2412 0.39 +1.2 2,571,921 + Psest_2412 0.39 -0.5 2,571,921 + Psest_2412 0.39 +1.1 2,571,922 - Psest_2412 0.39 -0.3 2,571,922 - Psest_2412 0.39 -0.0 2,571,922 - Psest_2412 0.39 +1.1 2,571,922 - Psest_2412 0.39 +1.1 2,571,922 - Psest_2412 0.39 +1.1 2,571,922 - Psest_2412 0.39 -0.9 2,571,922 - Psest_2412 0.39 +1.1 2,571,922 - Psest_2412 0.39 -0.3 2,571,999 + Psest_2412 0.43 -0.5 2,572,000 - Psest_2412 0.43 -0.3 2,572,000 - Psest_2412 0.43 +1.6 2,572,005 + Psest_2412 0.43 +0.5 2,572,005 + Psest_2412 0.43 +1.5 2,572,005 + Psest_2412 0.43 +1.9 2,572,005 + Psest_2412 0.43 -0.5 2,572,005 + Psest_2412 0.43 +0.6 2,572,006 - Psest_2412 0.43 -0.5 2,572,006 - Psest_2412 0.43 +0.1 2,572,006 - Psest_2412 0.43 -1.5 2,572,006 - Psest_2412 0.43 +0.1 2,572,006 - Psest_2412 0.43 +0.1 2,572,006 - Psest_2412 0.43 +1.1 2,572,006 - Psest_2412 0.43 +1.1 2,572,032 + Psest_2412 0.44 +0.1 2,572,033 - Psest_2412 0.44 +0.2 2,572,033 - Psest_2412 0.44 -1.3
Or see this region's nucleotide sequence