Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2357 and Psest_2358 overlap by 1 nucleotides Psest_2358 and Psest_2359 overlap by 4 nucleotides Psest_2359 and Psest_2360 overlap by 4 nucleotides Psest_2360 and Psest_2361 overlap by 4 nucleotides
Psest_2357: Psest_2357 - Short-chain dehydrogenases of various substrate specificities, at 2,512,503 to 2,513,291
_2357
Psest_2358: Psest_2358 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,513,291 to 2,514,049
_2358
Psest_2359: Psest_2359 - Predicted permeases, at 2,514,046 to 2,514,930
_2359
Psest_2360: Psest_2360 - Uncharacterized protein, putative amidase, at 2,514,927 to 2,515,688
_2360
Psest_2361: Psest_2361 - Amidases related to nicotinamidase, at 2,515,685 to 2,516,341
_2361
Position (kb)
2514
2515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2513.751 kb on - strand, within Psest_2358 at 2513.751 kb on - strand, within Psest_2358 at 2513.751 kb on - strand, within Psest_2358 at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.997 kb on - strand at 2514.169 kb on + strand, within Psest_2359 at 2514.169 kb on + strand, within Psest_2359 at 2514.170 kb on - strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2515.278 kb on + strand, within Psest_2360 at 2515.548 kb on + strand, within Psest_2360 at 2515.548 kb on + strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.834 kb on - strand, within Psest_2361
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 2,513,751 - Psest_2358 0.61 +0.3 2,513,751 - Psest_2358 0.61 -0.3 2,513,751 - Psest_2358 0.61 -0.5 2,513,996 + +1.0 2,513,996 + -2.0 2,513,996 + +0.6 2,513,996 + +0.0 2,513,997 - -1.3 2,514,169 + Psest_2359 0.14 +0.6 2,514,169 + Psest_2359 0.14 -1.0 2,514,170 - Psest_2359 0.14 -2.1 2,514,337 + Psest_2359 0.33 +0.0 2,514,337 + Psest_2359 0.33 -1.0 2,514,338 - Psest_2359 0.33 +1.0 2,514,338 - Psest_2359 0.33 -0.7 2,514,338 - Psest_2359 0.33 -0.5 2,515,278 + Psest_2360 0.46 +0.0 2,515,548 + Psest_2360 0.81 +1.0 2,515,548 + Psest_2360 0.81 +0.8 2,515,549 - Psest_2360 0.82 +0.0 2,515,549 - Psest_2360 0.82 +0.6 2,515,549 - Psest_2360 0.82 -1.0 2,515,549 - Psest_2360 0.82 +1.0 2,515,549 - Psest_2360 0.82 +1.0 2,515,549 - Psest_2360 0.82 -0.5 2,515,549 - Psest_2360 0.82 +2.0 2,515,549 - Psest_2360 0.82 -1.0 2,515,549 - Psest_2360 0.82 -1.0 2,515,834 - Psest_2361 0.23 +0.0
Or see this region's nucleotide sequence