Experiment: methylglyoxal 0.0016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2121 and Psest_2122 are separated by 8 nucleotides Psest_2122 and Psest_2123 are separated by 176 nucleotides Psest_2123 and Psest_2124 are separated by 51 nucleotides
Psest_2121: Psest_2121 - Predicted ATPase, at 2,252,501 to 2,253,610
_2121
Psest_2122: Psest_2122 - Parvulin-like peptidyl-prolyl isomerase, at 2,253,619 to 2,253,897
_2122
Psest_2123: Psest_2123 - fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) , at 2,254,074 to 2,255,204
_2123
Psest_2124: Psest_2124 - D-gluconate TRAP transporter, large permease component (from data) , at 2,255,256 to 2,256,533
_2124
Position (kb)
2254
2255
2256 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2253.476 kb on + strand, within Psest_2121 at 2253.477 kb on - strand, within Psest_2121 at 2253.477 kb on - strand, within Psest_2121 at 2253.477 kb on - strand, within Psest_2121 at 2253.497 kb on + strand, within Psest_2121 at 2253.497 kb on + strand, within Psest_2121 at 2253.498 kb on - strand, within Psest_2121 at 2253.498 kb on - strand, within Psest_2121 at 2253.500 kb on - strand at 2253.530 kb on + strand at 2253.531 kb on - strand at 2253.531 kb on - strand at 2253.531 kb on - strand at 2253.531 kb on - strand at 2253.788 kb on + strand, within Psest_2122 at 2253.788 kb on + strand, within Psest_2122 at 2253.932 kb on + strand at 2254.088 kb on + strand at 2254.535 kb on - strand, within Psest_2123 at 2254.664 kb on + strand, within Psest_2123 at 2254.665 kb on - strand, within Psest_2123 at 2254.698 kb on + strand, within Psest_2123 at 2255.228 kb on - strand at 2255.228 kb on - strand at 2255.255 kb on + strand at 2255.256 kb on - strand at 2255.256 kb on - strand at 2255.256 kb on - strand at 2255.256 kb on - strand at 2255.256 kb on - strand at 2255.256 kb on - strand at 2255.508 kb on + strand, within Psest_2124 at 2255.509 kb on - strand, within Psest_2124 at 2255.509 kb on - strand, within Psest_2124 at 2255.509 kb on - strand, within Psest_2124 at 2255.730 kb on + strand, within Psest_2124 at 2255.730 kb on + strand, within Psest_2124 at 2255.730 kb on + strand, within Psest_2124 at 2255.731 kb on - strand, within Psest_2124 at 2255.994 kb on + strand, within Psest_2124 at 2255.994 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.124 kb on - strand, within Psest_2124
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.0016 vol% remove 2,253,476 + Psest_2121 0.88 -0.8 2,253,477 - Psest_2121 0.88 +0.1 2,253,477 - Psest_2121 0.88 -0.5 2,253,477 - Psest_2121 0.88 +1.7 2,253,497 + Psest_2121 0.90 -0.8 2,253,497 + Psest_2121 0.90 -1.5 2,253,498 - Psest_2121 0.90 +1.1 2,253,498 - Psest_2121 0.90 +0.8 2,253,500 - +1.1 2,253,530 + +0.7 2,253,531 - +1.1 2,253,531 - +0.1 2,253,531 - -1.2 2,253,531 - +2.1 2,253,788 + Psest_2122 0.61 -1.7 2,253,788 + Psest_2122 0.61 -1.4 2,253,932 + -1.3 2,254,088 + +1.4 2,254,535 - Psest_2123 0.41 -1.5 2,254,664 + Psest_2123 0.52 -1.5 2,254,665 - Psest_2123 0.52 +0.5 2,254,698 + Psest_2123 0.55 -2.2 2,255,228 - +0.2 2,255,228 - +1.3 2,255,255 + -1.5 2,255,256 - -2.5 2,255,256 - +0.8 2,255,256 - +1.1 2,255,256 - +2.1 2,255,256 - +1.1 2,255,256 - +0.2 2,255,508 + Psest_2124 0.20 +0.6 2,255,509 - Psest_2124 0.20 +0.1 2,255,509 - Psest_2124 0.20 -1.4 2,255,509 - Psest_2124 0.20 -0.9 2,255,730 + Psest_2124 0.37 +0.1 2,255,730 + Psest_2124 0.37 -0.1 2,255,730 + Psest_2124 0.37 +0.9 2,255,731 - Psest_2124 0.37 +0.7 2,255,994 + Psest_2124 0.58 -0.2 2,255,994 + Psest_2124 0.58 -0.1 2,256,123 + Psest_2124 0.68 -0.2 2,256,123 + Psest_2124 0.68 +0.1 2,256,123 + Psest_2124 0.68 +0.8 2,256,123 + Psest_2124 0.68 -1.4 2,256,123 + Psest_2124 0.68 +0.5 2,256,123 + Psest_2124 0.68 -0.1 2,256,124 - Psest_2124 0.68 +0.0
Or see this region's nucleotide sequence